Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:86493156-86693588

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syn3 10 86055125 to 86498896 443771 - protein coding gene synapsin III
Tssr94997 10 86498284 to 86498292 8 + TSS region transcription start site region 94997
Cpgi2065 10 86498607 to 86499038 431 CpG island CpG island 2065
Tssr98768 10 86498836 to 86498858 22 - TSS region transcription start site region 98768
Tssr98769 10 86498872 to 86498909 37 - TSS region transcription start site region 98769
Gm6729 10 86526297 to 86541867 15570 - protein coding gene predicted gene 6729
Gm9583 10 86550808 to 86552650 1842 - pseudogene predicted gene 9583
Gm21027 10 86554947 to 86556182 1235 - pseudogene predicted gene, 21027
Gm48448 10 86569933 to 86571682 1749 + pseudogene predicted gene, 48448
Gm48450 10 86571763 to 86572966 1203 + pseudogene predicted gene, 48450
Gm48451 10 86573044 to 86574247 1203 + pseudogene predicted gene, 48451
Gm48454 10 86574323 to 86575528 1205 + pseudogene predicted gene, 48454
Gm48460 10 86575624 to 86575849 225 + pseudogene predicted gene, 48460
Tssr98770 10 86591497 to 86591519 22 - TSS region transcription start site region 98770
Gm46191 10 86593156 to 86593588 432 + pseudogene predicted gene, 46191
Gm48461 10 86600917 to 86601442 525 + pseudogene predicted gene, 48461
Gm48463 10 86601568 to 86601745 177 + pseudogene predicted gene, 48463
Gm48464 10 86601781 to 86602927 1146 + pseudogene predicted gene, 48464
Gm48465 10 86603008 to 86604202 1194 + pseudogene predicted gene, 48465
Gm48466 10 86604292 to 86604763 471 + pseudogene predicted gene, 48466
Gm48473 10 86620651 to 86620927 276 - pseudogene predicted gene, 48473
Gm48474 10 86620975 to 86622133 1158 - pseudogene predicted gene, 48474
Gm48475 10 86622256 to 86623999 1743 - pseudogene predicted gene, 48475
Cpgi2066 10 86636884 to 86637121 237 CpG island CpG island 2066
Gm19989 10 86637383 to 86638393 1010 + pseudogene predicted gene, 19989
Gm18876 10 86640683 to 86642531 1848 + pseudogene predicted gene, 18876
Gm5174 10 86655958 to 86657380 1422 + protein coding gene predicted gene 5174
Gm48485 10 86657405 to 86671018 13613 + lincRNA gene predicted gene, 48485
Cpgi2067 10 86685373 to 86685860 487 CpG island CpG island 2067
1810014B01Rik 10 86685527 to 86689954 4427 + pseudogene RIKEN cDNA 1810014B01 gene
Tssr94998 10 86685572 to 86685623 51 + TSS region transcription start site region 94998
Hsp90b1 10 86690841 to 86705444 14603 - protein coding gene heat shock protein 90, beta (Grp94), member 1
Tssr94999 10 86691630 to 86691684 54 + TSS region transcription start site region 94999
Tssr98771 10 86691698 to 86691755 57 - TSS region transcription start site region 98771
Gm15344 10 86692119 to 86693095 976 - unclassified non-coding RNA gene predicted gene 15344
Tssr98772 10 86693406 to 86693428 22 - TSS region transcription start site region 98772
Tssr98773 10 86693450 to 86693461 11 - TSS region transcription start site region 98773
Tssr98774 10 86693478 to 86693509 31 - TSS region transcription start site region 98774