Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:86026802-86346842

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxo7 10 86021875 to 86048336 26461 + protein coding gene F-box protein 7
Tssr94946 10 86032819 to 86032829 10 + TSS region transcription start site region 94946
Tssr94947 10 86032962 to 86032976 14 + TSS region transcription start site region 94947
Tssr94948 10 86032994 to 86033006 12 + TSS region transcription start site region 94948
Tssr94949 10 86033022 to 86033030 8 + TSS region transcription start site region 94949
Tssr94950 10 86033038 to 86033043 5 + TSS region transcription start site region 94950
Tssr94951 10 86033057 to 86033068 11 + TSS region transcription start site region 94951
Gm24430 10 86038685 to 86038788 103 - snRNA gene predicted gene, 24430
Tssr94952 10 86039958 to 86040005 47 + TSS region transcription start site region 94952
Syn3 10 86055125 to 86498896 443771 - protein coding gene synapsin III
Tssr98759 10 86057618 to 86057631 13 - TSS region transcription start site region 98759
Tssr98760 10 86057635 to 86057648 13 - TSS region transcription start site region 98760
Tssr94953 10 86068190 to 86068201 11 + TSS region transcription start site region 94953
D10Mit93 10 86078455 to 86078590 135 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 93
Tssr94954 10 86095836 to 86095860 24 + TSS region transcription start site region 94954
4930486F22Rik 10 86095859 to 86113586 17727 + antisense lncRNA gene RIKEN cDNA 4930486F22 gene
Tssr98761 10 86102161 to 86102166 5 - TSS region transcription start site region 98761
Tssr98762 10 86123204 to 86123224 20 - TSS region transcription start site region 98762
Tssr98763 10 86123246 to 86123280 34 - TSS region transcription start site region 98763
Tssr94955 10 86123474 to 86123482 8 + TSS region transcription start site region 94955
Tssr94956 10 86124410 to 86124443 33 + TSS region transcription start site region 94956
Gm15990 10 86125827 to 86129854 4027 + antisense lncRNA gene predicted gene 15990
Tssr94957 10 86139184 to 86139205 21 + TSS region transcription start site region 94957
Gm35636 10 86156131 to 86189543 33412 + lncRNA gene predicted gene, 35636
Tssr98764 10 86186548 to 86186572 24 - TSS region transcription start site region 98764
Tssr94958 10 86186802 to 86186842 40 + TSS region transcription start site region 94958
D10Mit8 10 86226257 to 86226453 196 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 8
Tssr98765 10 86295053 to 86295064 11 - TSS region transcription start site region 98765
Cpgi2063 10 86296204 to 86296360 156 CpG island CpG island 2063
Cpgi2064 10 86299904 to 86301100 1196 CpG island CpG island 2064
Timp3 10 86300412 to 86349505 49093 + protein coding gene tissue inhibitor of metalloproteinase 3
Tssr94959 10 86300546 to 86300562 16 + TSS region transcription start site region 94959
Tssr3301 10 86300630 to 86300647 17 + TSS region transcription start site region 3301
Tssr3302 10 86300674 to 86300683 9 + TSS region transcription start site region 3302
Tssr94960 10 86301186 to 86301188 2 + TSS region transcription start site region 94960
Tssr94961 10 86309976 to 86309985 9 + TSS region transcription start site region 94961
Tssr94962 10 86310934 to 86310955 21 + TSS region transcription start site region 94962
Tssr94963 10 86311015 to 86311054 39 + TSS region transcription start site region 94963
Tssr94964 10 86311228 to 86311255 27 + TSS region transcription start site region 94964
Tssr94965 10 86311302 to 86311350 48 + TSS region transcription start site region 94965
Tssr94966 10 86323887 to 86323892 5 + TSS region transcription start site region 94966
B930095M22Rik 10 86327026 to 86331185 4159 unclassified gene RIKEN cDNA B930095M22 gene
Tssr94967 10 86331626 to 86331629 3 + TSS region transcription start site region 94967
Tssr94968 10 86331652 to 86331660 8 + TSS region transcription start site region 94968
Tssr94969 10 86338407 to 86338424 17 + TSS region transcription start site region 94969
Tssr94970 10 86343938 to 86343957 19 + TSS region transcription start site region 94970
Tssr94971 10 86344553 to 86344562 9 + TSS region transcription start site region 94971
Tssr94972 10 86344597 to 86344617 20 + TSS region transcription start site region 94972
Tssr94973 10 86344626 to 86344647 21 + TSS region transcription start site region 94973
Tssr94974 10 86345820 to 86345840 20 + TSS region transcription start site region 94974
Tssr94975 10 86345851 to 86345867 16 + TSS region transcription start site region 94975
Tssr94976 10 86345895 to 86345947 52 + TSS region transcription start site region 94976
Tssr94977 10 86346016 to 86346024 8 + TSS region transcription start site region 94977
Tssr94978 10 86346042 to 86346084 42 + TSS region transcription start site region 94978
Tssr94979 10 86346117 to 86346138 21 + TSS region transcription start site region 94979
Tssr94980 10 86346145 to 86346163 18 + TSS region transcription start site region 94980
Tssr94981 10 86346228 to 86346244 16 + TSS region transcription start site region 94981
Tssr94982 10 86346533 to 86346543 10 + TSS region transcription start site region 94982