Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:82804260-83104748

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2024 10 82811818 to 82812631 813 CpG island CpG island 2024
1700028I16Rik 10 82812123 to 82824242 12119 + lincRNA gene RIKEN cDNA 1700028I16 gene
Tssr94831 10 82812199 to 82812209 10 + TSS region transcription start site region 94831
Tssr98684 10 82814133 to 82814153 20 - TSS region transcription start site region 98684
Tssr94832 10 82833891 to 82833897 6 + TSS region transcription start site region 94832
Tssr94833 10 82833926 to 82833945 19 + TSS region transcription start site region 94833
Txnrd1 10 82833951 to 82897712 63761 + protein coding gene thioredoxin reductase 1
Tssr94834 10 82833955 to 82833965 10 + TSS region transcription start site region 94834
Tssr94835 10 82833966 to 82833975 9 + TSS region transcription start site region 94835
Gm38560 10 82845733 to 82859008 13275 - bidirectional promoter lncRNA gene predicted gene, 38560
Gm47073 10 82851255 to 82852647 1392 - unclassified gene predicted gene, 47073
Cpgi2025 10 82858907 to 82859583 676 CpG island CpG island 2025
Tssr98685 10 82859053 to 82859131 78 - TSS region transcription start site region 98685
Tssr94836 10 82859198 to 82859217 19 + TSS region transcription start site region 94836
Tssr94837 10 82859221 to 82859232 11 + TSS region transcription start site region 94837
Cpgi2026 10 82860214 to 82860936 722 CpG island CpG island 2026
Tssr94838 10 82860247 to 82860280 33 + TSS region transcription start site region 94838
Tssr94839 10 82860283 to 82860299 16 + TSS region transcription start site region 94839
Tssr94840 10 82860301 to 82860343 42 + TSS region transcription start site region 94840
Tssr94841 10 82860489 to 82860550 61 + TSS region transcription start site region 94841
Tssr94842 10 82866602 to 82866614 12 + TSS region transcription start site region 94842
Tssr94843 10 82866615 to 82866646 31 + TSS region transcription start site region 94843
Eid3 10 82866626 to 82867930 1304 + protein coding gene EP300 interacting inhibitor of differentiation 3
Tssr94844 10 82866648 to 82866674 26 + TSS region transcription start site region 94844
Cpgi2027 10 82866823 to 82867175 352 CpG island CpG island 2027
Tssr94845 10 82874654 to 82874685 31 + TSS region transcription start site region 94845
Tssr94846 10 82877315 to 82877338 23 + TSS region transcription start site region 94846
Tssr94847 10 82879262 to 82879275 13 + TSS region transcription start site region 94847
Tssr94848 10 82879807 to 82879838 31 + TSS region transcription start site region 94848
Tssr94849 10 82881748 to 82881781 33 + TSS region transcription start site region 94849
Tssr94850 10 82881800 to 82881828 28 + TSS region transcription start site region 94850
Tssr94851 10 82881839 to 82881854 15 + TSS region transcription start site region 94851
Tssr94852 10 82881858 to 82881874 16 + TSS region transcription start site region 94852
Tssr94853 10 82887655 to 82887668 13 + TSS region transcription start site region 94853
Tssr94854 10 82887697 to 82887713 16 + TSS region transcription start site region 94854
Tssr94855 10 82887722 to 82887731 9 + TSS region transcription start site region 94855
9130221J17Rik 10 82891381 to 82895015 3634 unclassified gene RIKEN cDNA 9130221J17 gene
Tssr94856 10 82896868 to 82896880 12 + TSS region transcription start site region 94856
Tssr94857 10 82896913 to 82896934 21 + TSS region transcription start site region 94857
Tssr94858 10 82897062 to 82897073 11 + TSS region transcription start site region 94858
Tssr94859 10 82897234 to 82897265 31 + TSS region transcription start site region 94859
Tssr94860 10 82897434 to 82897446 12 + TSS region transcription start site region 94860
Tssr94861 10 82897472 to 82897514 42 + TSS region transcription start site region 94861
Gm33781 10 82927003 to 82934640 7637 - lncRNA gene predicted gene, 33781
Cpgi2028 10 82954260 to 82954748 488 CpG island CpG island 2028
Gm4799 10 82954344 to 82955000 656 + pseudogene predicted gene 4799
Tssr94862 10 82954556 to 82954567 11 + TSS region transcription start site region 94862
Tssr98686 10 82955197 to 82955200 3 - TSS region transcription start site region 98686
Tssr98687 10 82955348 to 82955373 25 - TSS region transcription start site region 98687
Tssr94863 10 82958211 to 82958213 2 + TSS region transcription start site region 94863
Tssr98688 10 82958390 to 82958440 50 - TSS region transcription start site region 98688
Tssr98689 10 82961467 to 82961468 1 - TSS region transcription start site region 98689
Cpgi2029 10 82984773 to 82986481 1708 CpG island CpG island 2029
Tssr94864 10 82985345 to 82985381 36 + TSS region transcription start site region 94864
Tssr94865 10 82985384 to 82985436 52 + TSS region transcription start site region 94865
Tssr94866 10 82985443 to 82985454 11 + TSS region transcription start site region 94866
Tssr94867 10 82985473 to 82985504 31 + TSS region transcription start site region 94867
Chst11 10 82985498 to 83195900 210402 + protein coding gene carbohydrate sulfotransferase 11
Tssr3293 10 82986375 to 82986387 12 - TSS region transcription start site region 3293
Tssr94868 10 82987210 to 82987211 1 + TSS region transcription start site region 94868
Pwgrq19 10 82992866 to 92333194 9340328 QTL post-weaning growth rate QTL 19
Gm10773 10 83027761 to 83031695 3934 - protein coding gene predicted gene 10773
Tssr94869 10 83094627 to 83094628 1 + TSS region transcription start site region 94869
Tssr94870 10 83098087 to 83098090 3 + TSS region transcription start site region 94870