Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81626911-82205480

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sirt6 10 81621786 to 81627797 6011 - protein coding gene sirtuin 6
Cpgi2009 10 81627231 to 81627873 642 CpG island CpG island 2009
Tssr98660 10 81627516 to 81627527 11 - TSS region transcription start site region 98660
Tssr98661 10 81627534 to 81627586 52 - TSS region transcription start site region 98661
Tssr98662 10 81627592 to 81627607 15 - TSS region transcription start site region 98662
Tssr94800 10 81627691 to 81627742 51 + TSS region transcription start site region 94800
Ankrd24 10 81628540 to 81647610 19070 + protein coding gene ankyrin repeat domain 24
Tssr94801 10 81628546 to 81628567 21 + TSS region transcription start site region 94801
Tssr94802 10 81628570 to 81628601 31 + TSS region transcription start site region 94802
Tssr3290 10 81628682 to 81628689 7 + TSS region transcription start site region 3290
Tssr94803 10 81628702 to 81628719 17 + TSS region transcription start site region 94803
Cpgi2010 10 81633254 to 81633943 689 CpG island CpG island 2010
Tssr94804 10 81633694 to 81633710 16 + TSS region transcription start site region 94804
Cpgi2011 10 81642775 to 81644305 1530 CpG island CpG island 2011
Tssr94805 10 81643594 to 81643680 86 + TSS region transcription start site region 94805
Tssr98663 10 81643736 to 81643767 31 - TSS region transcription start site region 98663
Tssr94806 10 81643797 to 81643856 59 + TSS region transcription start site region 94806
Cpgi2012 10 81648863 to 81649056 193 CpG island CpG island 2012
Tssr94807 10 81649007 to 81649040 33 + TSS region transcription start site region 94807
Gm10778 10 81649069 to 81667361 18292 + protein coding gene predicted gene 10778
Tssr94808 10 81651651 to 81651652 1 + TSS region transcription start site region 94808
Gm47527 10 81679122 to 81680511 1389 + pseudogene predicted gene, 47527
Gm8112 10 81693721 to 81694185 464 - pseudogene predicted gene 8112
Zfp433 10 81704192 to 81723814 19622 + protein coding gene zinc finger protein 433
Gm8249 10 81715945 to 81716409 464 + pseudogene predicted gene 8249
Gm47529 10 81717039 to 81717557 518 - pseudogene predicted gene, 47529
Gm5173 10 81727923 to 81728872 949 + pseudogene predicted gene 5173
Gm3055 10 81744980 to 81751833 6853 - protein coding gene predicted gene 3055
Gm47537 10 81804432 to 81805701 1269 + pseudogene predicted gene, 47537
Gm4767 10 81811937 to 81823898 11961 + protein coding gene predicted gene 4767
Gm8264 10 81818476 to 81818940 464 - pseudogene predicted gene 8264
Gm8137 10 81852816 to 81853278 462 - pseudogene predicted gene 8137
Gm32687 10 81863934 to 81881081 17147 + protein coding gene predicted gene, 32687
Gm8274 10 81875058 to 81875520 462 + pseudogene predicted gene 8274
Gm47539 10 81876151 to 81876667 516 - pseudogene predicted gene, 47539
Gm8153 10 81887013 to 81887964 951 + pseudogene predicted gene 8153
Zfp781 10 81901911 to 81930480 28569 - protein coding gene zinc finger protein 781
Gm47546 10 81963798 to 81965087 1289 + pseudogene predicted gene, 47546
Gm19802 10 81978089 to 81995360 17271 + protein coding gene predicted gene, 19802
Gm8158 10 81985938 to 81986402 464 - pseudogene predicted gene 8158
Gm10777 10 81995971 to 82011636 15665 + lncRNA gene predicted gene 10777
Gm8290 10 82008379 to 82008855 476 + pseudogene predicted gene 8290
Gm46194 10 82009481 to 82009800 319 - pseudogene predicted gene, 46194
Gm33378 10 82014473 to 82017230 2757 + protein coding gene predicted gene, 33378
Gm8170 10 82020551 to 82021495 944 + pseudogene predicted gene 8170
AL117821 10 82044643 to 82048039 3396 unclassified gene expressed sequence AL117821
Gm46195 10 82046447 to 82048048 1601 - lncRNA gene predicted gene, 46195
Cpgi2013 10 82047983 to 82048501 518 CpG island CpG island 2013
Tssr94809 10 82048104 to 82048146 42 + TSS region transcription start site region 94809
Zfp873 10 82048123 to 82064745 16622 + protein coding gene zinc finger protein 873
Tssr94810 10 82048150 to 82048157 7 + TSS region transcription start site region 94810
Gm18556 10 82056108 to 82057101 993 - pseudogene predicted gene, 18556
D430050E20Rik 10 82083010 to 82083621 611 unclassified non-coding RNA gene RIKEN cDNA D430050E20 gene
Tssr94811 10 82083312 to 82083365 53 + TSS region transcription start site region 94811
Cpgi2014 10 82083337 to 82083582 245 CpG island CpG island 2014
BC024063 10 82083353 to 82111216 27863 + protein coding gene cDNA sequence BC024063
Tssr94812 10 82102185 to 82102194 9 + TSS region transcription start site region 94812
4921506L19Rik 10 82126675 to 82128286 1611 unclassified gene RIKEN cDNA 4921506L19 gene
Cpgi2015 10 82127826 to 82128401 575 CpG island CpG island 2015
Tssr94813 10 82127998 to 82128020 22 + TSS region transcription start site region 94813
AU041133 10 82128013 to 82153065 25052 + protein coding gene expressed sequence AU041133
Tssr94814 10 82128024 to 82128046 22 + TSS region transcription start site region 94814
Gm47572 10 82157101 to 82160461 3360 + unclassified gene predicted gene, 47572
Gm47573 10 82164247 to 82166784 2537 + unclassified gene predicted gene, 47573
Gm40720 10 82177630 to 82191292 13662 + lncRNA gene predicted gene, 40720
Cpgi2016 10 82178147 to 82178794 647 CpG island CpG island 2016
Tssr3291 10 82178325 to 82178345 20 + TSS region transcription start site region 3291
Gm15608 10 82194555 to 82201488 6933 + lincRNA gene predicted gene 15608