Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81075918-81135932

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thop1 10 81070083 to 81082360 12277 + protein coding gene thimet oligopeptidase 1
Cpgi1939 10 81080029 to 81080638 609 CpG island CpG island 1939
Creb3l3 10 81084333 to 81098872 14539 - protein coding gene cAMP responsive element binding protein 3-like 3
Tssr98554 10 81089333 to 81089342 9 - TSS region transcription start site region 98554
Tssr98555 10 81092540 to 81092546 6 - TSS region transcription start site region 98555
Tssr98556 10 81092554 to 81092561 7 - TSS region transcription start site region 98556
Tssr98557 10 81092575 to 81092633 58 - TSS region transcription start site region 98557
Tssr98558 10 81092653 to 81092664 11 - TSS region transcription start site region 98558
D10Mit7 10 81098438 to 81098583 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 7
Tssr94670 10 81102683 to 81102688 5 + TSS region transcription start site region 94670
Mir5615-1 10 81104614 to 81104673 59 - miRNA gene microRNA 5615-1
Mir5615-2 10 81104616 to 81104675 59 + miRNA gene microRNA 5615-2
Cpgi1940 10 81105396 to 81106840 1444 CpG island CpG island 1940
Tssr98559 10 81105841 to 81105883 42 - TSS region transcription start site region 98559
Map2k2 10 81105912 to 81124697 18785 + protein coding gene mitogen-activated protein kinase kinase 2
Tssr94671 10 81105918 to 81105932 14 + TSS region transcription start site region 94671
Tssr94672 10 81105933 to 81106004 71 + TSS region transcription start site region 94672
Tssr94673 10 81118124 to 81118159 35 + TSS region transcription start site region 94673
Tssr94674 10 81120933 to 81120986 53 + TSS region transcription start site region 94674
Tssr94675 10 81123818 to 81123825 7 + TSS region transcription start site region 94675
Tssr94676 10 81128975 to 81128998 23 + TSS region transcription start site region 94676
Cpgi1941 10 81128995 to 81129693 698 CpG island CpG island 1941
Tssr98560 10 81129048 to 81129085 37 - TSS region transcription start site region 98560
Tssr98561 10 81129450 to 81129461 11 - TSS region transcription start site region 98561
Cpgi1942 10 81134213 to 81134486 273 CpG island CpG island 1942
Tssr98562 10 81134377 to 81134419 42 - TSS region transcription start site region 98562
Tssr94677 10 81134464 to 81134495 31 + TSS region transcription start site region 94677
Cpgi1943 10 81135151 to 81138771 3620 CpG island CpG island 1943
Zbtb7a 10 81135225 to 81152222 16997 + protein coding gene zinc finger and BTB domain containing 7a
Tssr94678 10 81135273 to 81135291 18 + TSS region transcription start site region 94678
Tssr94679 10 81135464 to 81135491 27 + TSS region transcription start site region 94679