Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80025378-80125407

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap45 10 80016672 to 80031471 14799 + protein coding gene Rho GTPase activating protein 45
Cpgi1838 10 80026092 to 80026420 328 CpG island CpG island 1838
Tssr98377 10 80031460 to 80031470 10 - TSS region transcription start site region 98377
Polr2e 10 80035953 to 80039659 3706 - protein coding gene polymerase (RNA) II (DNA directed) polypeptide E
Tssr98378 10 80036755 to 80036766 11 - TSS region transcription start site region 98378
Cpgi1839 10 80039285 to 80040071 786 CpG island CpG island 1839
Tssr98379 10 80039645 to 80039672 27 - TSS region transcription start site region 98379
Tssr98380 10 80039674 to 80039724 50 - TSS region transcription start site region 98380
Tssr94470 10 80047009 to 80047030 21 + TSS region transcription start site region 94470
Gpx4 10 80047166 to 80056439 9273 + protein coding gene glutathione peroxidase 4
Tssr94471 10 80047247 to 80047264 17 + TSS region transcription start site region 94471
Tssr94472 10 80053187 to 80053190 3 + TSS region transcription start site region 94472
Cpgi1840 10 80053250 to 80054871 1621 CpG island CpG island 1840
Tssr98381 10 80053359 to 80053414 55 - TSS region transcription start site region 98381
Tssr94473 10 80053559 to 80053570 11 + TSS region transcription start site region 94473
Tssr94474 10 80053623 to 80053665 42 + TSS region transcription start site region 94474
Tssr94475 10 80053966 to 80053984 18 + TSS region transcription start site region 94475
Tssr94476 10 80053997 to 80054026 29 + TSS region transcription start site region 94476
Tssr94477 10 80054029 to 80054043 14 + TSS region transcription start site region 94477
Tssr94478 10 80054046 to 80054053 7 + TSS region transcription start site region 94478
Sbno2 10 80056992 to 80105571 48579 - protein coding gene strawberry notch 2
Gm46237 10 80073893 to 80081724 7831 + lncRNA gene predicted gene, 46237
Tssr98382 10 80075050 to 80075090 40 - TSS region transcription start site region 98382
Cpgi1841 10 80075085 to 80075468 383 CpG island CpG island 1841
Tssr98383 10 80075275 to 80075301 26 - TSS region transcription start site region 98383
Tssr98384 10 80075360 to 80075377 17 - TSS region transcription start site region 98384
Tssr98385 10 80075378 to 80075407 29 - TSS region transcription start site region 98385
Tssr98386 10 80075411 to 80075453 42 - TSS region transcription start site region 98386
Tssr98387 10 80075469 to 80075478 9 - TSS region transcription start site region 98387
Tssr94479 10 80075582 to 80075605 23 + TSS region transcription start site region 94479
Tssr98388 10 80080524 to 80080531 7 - TSS region transcription start site region 98388
Tssr98389 10 80098543 to 80098546 3 - TSS region transcription start site region 98389
Tssr98390 10 80101125 to 80101139 14 - TSS region transcription start site region 98390
Tssr98391 10 80101154 to 80101172 18 - TSS region transcription start site region 98391
Cpgi1842 10 80102185 to 80102957 772 CpG island CpG island 1842
Tssr98392 10 80102640 to 80102651 11 - TSS region transcription start site region 98392
Tssr98393 10 80102653 to 80102728 75 - TSS region transcription start site region 98393
Tssr98394 10 80104301 to 80104312 11 - TSS region transcription start site region 98394
Tssr98395 10 80104334 to 80104376 42 - TSS region transcription start site region 98395
Tssr98396 10 80105566 to 80105577 11 - TSS region transcription start site region 98396
Tssr98397 10 80105586 to 80105617 31 - TSS region transcription start site region 98397
Tssr98398 10 80105668 to 80105704 36 - TSS region transcription start site region 98398
Tssr98399 10 80106069 to 80106121 52 - TSS region transcription start site region 98399
Cpgi1843 10 80114752 to 80117473 2721 CpG island CpG island 1843
Tssr94480 10 80115779 to 80115824 45 + TSS region transcription start site region 94480
Stk11 10 80115803 to 80130682 14879 + protein coding gene serine/threonine kinase 11
Tssr94481 10 80115863 to 80115886 23 + TSS region transcription start site region 94481
Tssr94482 10 80116233 to 80116266 33 + TSS region transcription start site region 94482
Tssr94483 10 80116267 to 80116278 11 + TSS region transcription start site region 94483
Tssr94484 10 80116379 to 80116389 10 + TSS region transcription start site region 94484
Tssr98400 10 80117115 to 80117126 11 - TSS region transcription start site region 98400
Tssr94485 10 80117295 to 80117311 16 + TSS region transcription start site region 94485
Tssr98401 10 80117986 to 80117990 4 - TSS region transcription start site region 98401
Tssr98402 10 80121754 to 80121767 13 - TSS region transcription start site region 98402
Tssr98403 10 80121795 to 80121802 7 - TSS region transcription start site region 98403
Tssr94486 10 80121939 to 80121950 11 + TSS region transcription start site region 94486