Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:79727289-79827298

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hcn2 10 79716634 to 79736108 19474 + protein coding gene hyperpolarization-activated, cyclic nucleotide-gated K+ 2
Tssr94385 10 79728750 to 79728772 22 + TSS region transcription start site region 94385
Cpgi1804 10 79728896 to 79729059 163 CpG island CpG island 1804
Cpgi1805 10 79734706 to 79736816 2110 CpG island CpG island 1805
Polrmt 10 79736123 to 79746581 10458 - protein coding gene polymerase (RNA) mitochondrial (DNA directed)
Cpgi1806 10 79737991 to 79738194 203 CpG island CpG island 1806
Tssr98340 10 79746084 to 79746088 4 - TSS region transcription start site region 98340
Cpgi1807 10 79746293 to 79746765 472 CpG island CpG island 1807
Tssr98341 10 79746553 to 79746586 33 - TSS region transcription start site region 98341
Fgf22 10 79754575 to 79757572 2997 + protein coding gene fibroblast growth factor 22
Cpgi1808 10 79754961 to 79755507 546 CpG island CpG island 1808
Tssr94386 10 79755103 to 79755126 23 + TSS region transcription start site region 94386
Rnf126 10 79758515 to 79766952 8437 - protein coding gene ring finger protein 126
Tssr98342 10 79759176 to 79759227 51 - TSS region transcription start site region 98342
Tssr94387 10 79761024 to 79761035 11 + TSS region transcription start site region 94387
Tssr98343 10 79761050 to 79761085 35 - TSS region transcription start site region 98343
Tssr98344 10 79761495 to 79761496 1 - TSS region transcription start site region 98344
Tssr98345 10 79762509 to 79762536 27 - TSS region transcription start site region 98345
Cpgi1809 10 79766035 to 79767876 1841 CpG island CpG island 1809
Tssr98346 10 79766792 to 79766803 11 - TSS region transcription start site region 98346
Tssr98347 10 79766811 to 79766825 14 - TSS region transcription start site region 98347
Tssr98348 10 79766872 to 79766950 78 - TSS region transcription start site region 98348
Tssr98349 10 79766957 to 79766976 19 - TSS region transcription start site region 98349
Tssr98350 10 79766994 to 79767017 23 - TSS region transcription start site region 98350
Cpgi1810 10 79776819 to 79777599 780 CpG island CpG island 1810
Tssr94388 10 79777261 to 79777280 19 + TSS region transcription start site region 94388
Fstl3 10 79777274 to 79782630 5356 + protein coding gene follistatin-like 3
Tssr94389 10 79777289 to 79777298 9 + TSS region transcription start site region 94389
Cpgi1811 10 79779791 to 79781405 1614 CpG island CpG island 1811
Tssr94390 10 79780972 to 79780984 12 + TSS region transcription start site region 94390
Tssr94391 10 79781152 to 79781161 9 + TSS region transcription start site region 94391
Prss57 10 79781474 to 79790961 9487 - protein coding gene protease, serine 57
Cpgi1812 10 79784340 to 79784681 341 CpG island CpG island 1812
Tssr98351 10 79788924 to 79788984 60 - TSS region transcription start site region 98351
Cpgi1813 10 79793053 to 79794183 1130 CpG island CpG island 1813
Tssr94392 10 79793322 to 79793334 12 + TSS region transcription start site region 94392
Tssr94393 10 79793553 to 79793621 68 + TSS region transcription start site region 94393
Palm 10 79793572 to 79820896 27324 + protein coding gene paralemmin
Tssr94394 10 79793658 to 79793673 15 + TSS region transcription start site region 94394
Tssr94395 10 79793677 to 79793721 44 + TSS region transcription start site region 94395
Gm48495 10 79793781 to 79794656 875 - antisense lncRNA gene predicted gene, 48495
Gm40713 10 79800681 to 79807025 6344 - lncRNA gene predicted gene, 40713
Cpgi1814 10 79803729 to 79804128 399 CpG island CpG island 1814
Tssr94396 10 79805986 to 79806005 19 + TSS region transcription start site region 94396
Tssr94397 10 79806012 to 79806031 19 + TSS region transcription start site region 94397
Tssr98352 10 79807068 to 79807099 31 - TSS region transcription start site region 98352
Tssr98353 10 79807110 to 79807135 25 - TSS region transcription start site region 98353
Tssr94398 10 79807262 to 79807277 15 + TSS region transcription start site region 94398
Tssr94399 10 79807282 to 79807320 38 + TSS region transcription start site region 94399
Tssr94400 10 79814586 to 79814623 37 + TSS region transcription start site region 94400
Tssr94401 10 79814666 to 79814684 18 + TSS region transcription start site region 94401
Tssr94402 10 79821006 to 79821029 23 + TSS region transcription start site region 94402
Misp 10 79821019 to 79830452 9433 + protein coding gene mitotic spindle positioning
Tssr94403 10 79822617 to 79822679 62 + TSS region transcription start site region 94403
Tssr94404 10 79824588 to 79824618 30 + TSS region transcription start site region 94404
Tssr94405 10 79824673 to 79824695 22 + TSS region transcription start site region 94405
Tssr94406 10 79824704 to 79824720 16 + TSS region transcription start site region 94406
Tssr94407 10 79826006 to 79826023 17 + TSS region transcription start site region 94407
Tssr94408 10 79826118 to 79826138 20 + TSS region transcription start site region 94408
Tssr94409 10 79826314 to 79826320 6 + TSS region transcription start site region 94409