Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:62978860-63068871

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1641 10 62979975 to 62980914 939 CpG island CpG island 1641
Rufy2 10 62980223 to 63017210 36987 + protein coding gene RUN and FYVE domain-containing 2
Tssr93740 10 62980233 to 62980261 28 + TSS region transcription start site region 93740
Tssr93741 10 62980280 to 62980291 11 + TSS region transcription start site region 93741
Cpgi1642 10 62990823 to 62990990 167 CpG island CpG island 1642
Gm16135 10 62998779 to 62999689 910 + antisense lncRNA gene predicted gene 16135
Hnrnph3 10 63014664 to 63023932 9268 - protein coding gene heterogeneous nuclear ribonucleoprotein H3
Tssr97894 10 63017589 to 63017611 22 - TSS region transcription start site region 97894
Tssr97895 10 63018085 to 63018111 26 - TSS region transcription start site region 97895
Tssr97896 10 63019904 to 63019911 7 - TSS region transcription start site region 97896
Cpgi1643 10 63022758 to 63024444 1686 CpG island CpG island 1643
Tssr93742 10 63023333 to 63023352 19 + TSS region transcription start site region 93742
Tssr97897 10 63023734 to 63023741 7 - TSS region transcription start site region 97897
Tssr97898 10 63023762 to 63023765 3 - TSS region transcription start site region 97898
Tssr97899 10 63023776 to 63023784 8 - TSS region transcription start site region 97899
Tssr97900 10 63023806 to 63023824 18 - TSS region transcription start site region 97900
Tssr97901 10 63023860 to 63023871 11 - TSS region transcription start site region 97901
Tssr97902 10 63023881 to 63023907 26 - TSS region transcription start site region 97902
Tssr97903 10 63023913 to 63023918 5 - TSS region transcription start site region 97903
Pbld2 10 63024315 to 63058813 34498 + protein coding gene phenazine biosynthesis-like protein domain containing 2
Tssr93743 10 63039101 to 63039117 16 + TSS region transcription start site region 93743
Gm16143 10 63055603 to 63056819 1216 - antisense lncRNA gene predicted gene 16143
Tssr97904 10 63057444 to 63057459 15 - TSS region transcription start site region 97904
Tssr97905 10 63057472 to 63057490 18 - TSS region transcription start site region 97905
Pbld1 10 63060624 to 63077964 17340 + protein coding gene phenazine biosynthesis-like protein domain containing 1
Tssr93744 10 63060630 to 63060657 27 + TSS region transcription start site region 93744
Tssr93745 10 63060725 to 63060752 27 + TSS region transcription start site region 93745
Tssr93746 10 63061535 to 63061548 13 + TSS region transcription start site region 93746
Tssr93747 10 63061586 to 63061602 16 + TSS region transcription start site region 93747