Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:62120549-62480570

Filter by:
73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1620 10 62127886 to 62128037 151 CpG island CpG island 1620
Cpgi1621 10 62128598 to 62129066 468 CpG island CpG island 1621
Cpgi1622 10 62132764 to 62134121 1357 CpG island CpG island 1622
Tssr93697 10 62133082 to 62133098 16 + TSS region transcription start site region 93697
Neurog3 10 62133090 to 62134763 1673 + protein coding gene neurogenin 3
Tssr97790 10 62143917 to 62143924 7 - TSS region transcription start site region 97790
Tspan15 10 62185396 to 62231251 45855 - protein coding gene tetraspanin 15
Tssr97791 10 62187486 to 62187491 5 - TSS region transcription start site region 97791
Tssr97792 10 62190860 to 62190873 13 - TSS region transcription start site region 97792
Mir7662 10 62194167 to 62194227 60 - miRNA gene microRNA 7662
Tssr97793 10 62194199 to 62194211 12 - TSS region transcription start site region 97793
Cpgi1623 10 62230634 to 62231655 1021 CpG island CpG island 1623
Tssr97794 10 62231208 to 62231232 24 - TSS region transcription start site region 97794
Tssr97795 10 62231249 to 62231252 3 - TSS region transcription start site region 97795
Tssr93698 10 62231419 to 62231424 5 + TSS region transcription start site region 93698
Tssr93699 10 62252325 to 62252357 32 + TSS region transcription start site region 93699
Tacr2 10 62252438 to 62265990 13552 + protein coding gene tachykinin receptor 2
Tssr93700 10 62252731 to 62252766 35 + TSS region transcription start site region 93700
Tssr93701 10 62253047 to 62253057 10 + TSS region transcription start site region 93701
Tssr93702 10 62253090 to 62253108 18 + TSS region transcription start site region 93702
Tssr93703 10 62253111 to 62253121 10 + TSS region transcription start site region 93703
Hk1 10 62268855 to 62379908 111053 - protein coding gene hexokinase 1
Tssr93704 10 62300549 to 62300570 21 + TSS region transcription start site region 93704
Tssr97796 10 62327582 to 62327599 17 - TSS region transcription start site region 97796
Tssr97797 10 62327602 to 62327655 53 - TSS region transcription start site region 97797
Tssr97798 10 62327666 to 62327679 13 - TSS region transcription start site region 97798
Cpgi1624 10 62327681 to 62327952 271 CpG island CpG island 1624
Tssr97799 10 62327757 to 62327768 11 - TSS region transcription start site region 97799
Tssr97800 10 62327777 to 62327787 10 - TSS region transcription start site region 97800
Tssr97801 10 62337390 to 62337395 5 - TSS region transcription start site region 97801
Tssr93705 10 62338895 to 62338921 26 + TSS region transcription start site region 93705
Tssr3221 10 62339295 to 62339315 20 - TSS region transcription start site region 3221
Tssr3222 10 62339329 to 62339338 9 - TSS region transcription start site region 3222
Cpgi1625 10 62339524 to 62340746 1222 CpG island CpG island 1625
Tssr97802 10 62340110 to 62340121 11 - TSS region transcription start site region 97802
Tssr97803 10 62340134 to 62340154 20 - TSS region transcription start site region 97803
Tssr97804 10 62340157 to 62340181 24 - TSS region transcription start site region 97804
Tssr93706 10 62340228 to 62340242 14 + TSS region transcription start site region 93706
Tssr97805 10 62340514 to 62340549 35 - TSS region transcription start site region 97805
Hk1os 10 62340607 to 62349866 9259 + antisense lncRNA gene hexokinase 1, opposite strand
Tssr93707 10 62340619 to 62340684 65 + TSS region transcription start site region 93707
Tssr97806 10 62342633 to 62342642 9 - TSS region transcription start site region 97806
Tssr97807 10 62342644 to 62342660 16 - TSS region transcription start site region 97807
Tssr97808 10 62342663 to 62342672 9 - TSS region transcription start site region 97808
Tssr97809 10 62342674 to 62342718 44 - TSS region transcription start site region 97809
Tssr97810 10 62342726 to 62342733 7 - TSS region transcription start site region 97810
Tssr97811 10 62342736 to 62342751 15 - TSS region transcription start site region 97811
Tssr97812 10 62362265 to 62362313 48 - TSS region transcription start site region 97812
Tssr93708 10 62362329 to 62362353 24 + TSS region transcription start site region 93708
Gm40675 10 62362337 to 62363611 1274 + lncRNA gene predicted gene, 40675
Tssr97813 10 62379901 to 62379917 16 - TSS region transcription start site region 97813
Tssr97814 10 62379919 to 62379930 11 - TSS region transcription start site region 97814
Hkdc1 10 62383137 to 62422464 39327 - protein coding gene hexokinase domain containing 1
n-TAagc6 10 62391124 to 62391196 72 - tRNA gene nuclear encoded tRNA alanine 6 (anticodon AGC)
Cpgi1626 10 62401646 to 62401931 285 CpG island CpG island 1626
Cpgi1627 10 62405152 to 62405609 457 CpG island CpG island 1627
Tssr97815 10 62422364 to 62422375 11 - TSS region transcription start site region 97815
Tssr97816 10 62422398 to 62422409 11 - TSS region transcription start site region 97816
Tssr97817 10 62422418 to 62422425 7 - TSS region transcription start site region 97817
Tssr97818 10 62422427 to 62422448 21 - TSS region transcription start site region 97818
Gm30322 10 62422506 to 62430006 7500 + lncRNA gene predicted gene, 30322
Supv3l1 10 62429209 to 62449738 20529 - protein coding gene suppressor of var1, 3-like 1 (S. cerevisiae)
Tssr93709 10 62432649 to 62432656 7 + TSS region transcription start site region 93709
Cpgi1628 10 62449213 to 62450386 1173 CpG island CpG island 1628
4930507D05Rik 10 62449489 to 62451322 1833 + unclassified gene RIKEN cDNA 4930507D05 gene
Tssr97819 10 62449679 to 62449733 54 - TSS region transcription start site region 97819
Tssr97820 10 62449738 to 62449757 19 - TSS region transcription start site region 97820
Vps26a 10 62455235 to 62486805 31570 - protein coding gene VPS26 retromer complex component A
Tssr97821 10 62455680 to 62455692 12 - TSS region transcription start site region 97821
Tssr97822 10 62456310 to 62456322 12 - TSS region transcription start site region 97822
Tssr97823 10 62468319 to 62468345 26 - TSS region transcription start site region 97823
Tssr97824 10 62477758 to 62477763 5 - TSS region transcription start site region 97824
Tssr97825 10 62477923 to 62477928 5 - TSS region transcription start site region 97825