Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:60901268-61161307

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq11 10 56604060 to 61105062 4501002 QTL conditioned fear QTL 11
Mir6408 10 60923023 to 60923113 90 + miRNA gene microRNA 6408
Gm46227 10 60927343 to 60928325 982 + lncRNA gene predicted gene, 46227
Pldi 10 60928226 to 60938132 9906 - lincRNA gene polymorphic derived intron containing
Gm26947 10 60931986 to 60940634 8648 + antisense lncRNA gene predicted gene, 26947
Tssr93640 10 60931990 to 60932004 14 + TSS region transcription start site region 93640
Tssr93641 10 60932036 to 60932050 14 + TSS region transcription start site region 93641
Tssr93642 10 60932338 to 60932365 27 + TSS region transcription start site region 93642
Tssr93643 10 60933087 to 60933099 12 + TSS region transcription start site region 93643
Tssr97741 10 60938099 to 60938114 15 - TSS region transcription start site region 97741
Tssr97742 10 60938123 to 60938142 19 - TSS region transcription start site region 97742
Tssr97743 10 60958072 to 60958082 10 - TSS region transcription start site region 97743
Mir466j 10 60960723 to 60960844 121 + miRNA gene microRNA 466j
Tssr93644 10 61031268 to 61031307 39 + TSS region transcription start site region 93644
Gm20611 10 61031303 to 61038080 6777 + lincRNA gene predicted gene 20611
Gm20625 10 61038229 to 61042811 4582 - lincRNA gene predicted gene 20625
Gm20610 10 61046422 to 61051900 5478 - lincRNA gene predicted gene 20610
Cpgi1600 10 61089237 to 61089683 446 CpG island CpG island 1600
Tssr93645 10 61089327 to 61089345 18 + TSS region transcription start site region 93645
Pcbd1 10 61089331 to 61094324 4993 + protein coding gene pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1
Tssr93646 10 61089348 to 61089396 48 + TSS region transcription start site region 93646
Sgpl1 10 61098642 to 61147684 49042 - protein coding gene sphingosine phosphate lyase 1
Tssr97744 10 61098843 to 61098923 80 - TSS region transcription start site region 97744
Tssr97745 10 61099031 to 61099043 12 - TSS region transcription start site region 97745
Tssr97746 10 61099814 to 61099854 40 - TSS region transcription start site region 97746
Tssr97747 10 61099981 to 61099995 14 - TSS region transcription start site region 97747
Tssr97748 10 61100089 to 61100109 20 - TSS region transcription start site region 97748
Tssr97749 10 61100561 to 61100577 16 - TSS region transcription start site region 97749
Tssr97750 10 61100690 to 61100710 20 - TSS region transcription start site region 97750
Tssr97751 10 61114152 to 61114167 15 - TSS region transcription start site region 97751
Gm44308 10 61125137 to 61125235 98 - miRNA gene predicted gene, 44308
Cpgi1601 10 61146144 to 61148060 1916 CpG island CpG island 1601
Tssr97752 10 61146323 to 61146337 14 - TSS region transcription start site region 97752
Tssr97753 10 61147595 to 61147620 25 - TSS region transcription start site region 97753
Tssr97754 10 61147625 to 61147644 19 - TSS region transcription start site region 97754
Tssr97755 10 61147659 to 61147680 21 - TSS region transcription start site region 97755