MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:60116662-60206669

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Spock2	10	60106257 to 60135198	28941	+	protein coding gene	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
Tssr93523	10	60126124 to 60126154	30	+	TSS region	transcription start site region 93523
Mir6906	10	60126776 to 60126833	57	+	miRNA gene	microRNA 6906
Tssr93524	10	60129675 to 60129681	6	+	TSS region	transcription start site region 93524
Tssr93525	10	60131959 to 60131970	11	+	TSS region	transcription start site region 93525
Tssr93526	10	60132893 to 60132915	22	+	TSS region	transcription start site region 93526
Tssr93527	10	60132921 to 60132961	40	+	TSS region	transcription start site region 93527
Tssr93528	10	60133618 to 60133647	29	+	TSS region	transcription start site region 93528
Tssr93529	10	60134777 to 60134810	33	+	TSS region	transcription start site region 93529
Tssr93530	10	60161625 to 60161637	12	+	TSS region	transcription start site region 93530
Tssr93531	10	60161662 to 60161669	7	+	TSS region	transcription start site region 93531
Tssr97693	10	60162372 to 60162382	10	-	TSS region	transcription start site region 97693
Tssr97694	10	60162384 to 60162398	14	-	TSS region	transcription start site region 97694
Tssr3211	10	60162412 to 60162415	3	-	TSS region	transcription start site region 3211
Chst3	10	60181532 to 60219260	37728	-	protein coding gene	carbohydrate sulfotransferase 3
Cpgi1585	10	60185753 to 60186873	1120		CpG island	CpG island 1585
Tssr97695	10	60189711 to 60189715	4	-	TSS region	transcription start site region 97695
Cpgi1586	10	60191720 to 60192112	392		CpG island	CpG island 1586