Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:5771565-7034977

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30617 10 5784832 to 5791511 6679 - lncRNA gene predicted gene, 30617
Fbxo5 10 5799158 to 5805465 6307 - protein coding gene F-box protein 5
Tssr96560 10 5804598 to 5804623 25 - TSS region transcription start site region 96560
Cpgi1259 10 5804673 to 5806230 1557 CpG island CpG island 1259
Tssr96561 10 5805353 to 5805364 11 - TSS region transcription start site region 96561
Tssr96562 10 5805394 to 5805408 14 - TSS region transcription start site region 96562
Tssr96563 10 5805412 to 5805454 42 - TSS region transcription start site region 96563
D10Mit1009 10 5807258 to 5807352 94 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 1009
Mtrf1l 10 5811887 to 5823910 12023 - protein coding gene mitochondrial translational release factor 1-like
Cpgi1258 10 5823344 to 5824493 1149 CpG island CpG island 1258
Tssr96564 10 5823819 to 5823873 54 - TSS region transcription start site region 96564
Tssr96565 10 5823880 to 5823937 57 - TSS region transcription start site region 96565
Rgs17 10 5825663 to 5922400 96737 - protein coding gene regulator of G-protein signaling 17
Tssr96566 10 5828020 to 5828034 14 - TSS region transcription start site region 96566
Tssr96567 10 5828097 to 5828108 11 - TSS region transcription start site region 96567
Gm18902 10 5848464 to 5849565 1101 - pseudogene predicted gene, 18902
Cpgi1257 10 5921375 to 5922806 1431 CpG island CpG island 1257
Tssr96568 10 5922325 to 5922328 3 - TSS region transcription start site region 96568
Tssr96569 10 5922341 to 5922384 43 - TSS region transcription start site region 96569
Tssr96570 10 5922385 to 5922407 22 - TSS region transcription start site region 96570
Cpgi1256 10 6035834 to 6036134 300 CpG island CpG island 1256
D10Mit49 10 6201945 to 6202049 104 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 49
Gm3213 10 6367676 to 6368484 808 + protein coding gene predicted gene 3213
Gm46187 10 6401565 to 6404977 3412 + pseudogene predicted gene, 46187
Gm47755 10 6422698 to 6422884 186 + pseudogene predicted gene, 47755
Gm4921 10 6525883 to 6526874 991 - pseudogene predicted gene 4921
Gm10945 10 6740629 to 6761761 21132 - protein coding gene predicted gene 10945
Oprm1 10 6758593 to 7038209 279616 + protein coding gene opioid receptor, mu 1
Cpgi1255 10 6788572 to 6789111 539 CpG island CpG island 1255
Tssr92291 10 6788578 to 6788617 39 + TSS region transcription start site region 92291
Tssr92292 10 6788699 to 6788716 17 + TSS region transcription start site region 92292
Tssr92293 10 6788830 to 6788843 13 + TSS region transcription start site region 92293
Tssr92294 10 6789044 to 6789051 7 + TSS region transcription start site region 92294
Tssr92295 10 6851719 to 6851721 2 + TSS region transcription start site region 92295
Ipcef1 10 6885796 to 7052478 166682 - protein coding gene interaction protein for cytohesin exchange factors 1
Tssr96571 10 6916326 to 6916327 1 - TSS region transcription start site region 96571
D10Mit75 10 6918563 to 6918712 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 75
Tssr3123 10 6979595 to 6979615 20 + TSS region transcription start site region 3123
Tssr96572 10 6980065 to 6980068 3 - TSS region transcription start site region 96572
Tssr96573 10 6980296 to 6980320 24 - TSS region transcription start site region 96573
Tssr96574 10 6980346 to 6980355 9 - TSS region transcription start site region 96574
Tssr96575 10 6980389 to 6980398 9 - TSS region transcription start site region 96575
Tssr96576 10 6980445 to 6980490 45 - TSS region transcription start site region 96576
Tssr96577 10 6980499 to 6980508 9 - TSS region transcription start site region 96577
Tssr96578 10 6982942 to 6982965 23 - TSS region transcription start site region 96578
Tssr3124 10 6986531 to 6986552 21 + TSS region transcription start site region 3124
Ath11 10 58857699 to 6201945 -52655754 QTL atherosclerosis 11