Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:56389550-56619873

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gja1 10 56377300 to 56390419 13119 + protein coding gene gap junction protein, alpha 1
Tssr97622 10 56389550 to 56389580 30 - TSS region transcription start site region 97622
Tssr3204 10 56389696 to 56389715 19 + TSS region transcription start site region 3204
Tssr93373 10 56389790 to 56389798 8 + TSS region transcription start site region 93373
Gm36460 10 56395138 to 56399289 4151 + lncRNA gene predicted gene, 36460
Gm36517 10 56417339 to 56418001 662 - lncRNA gene predicted gene, 36517
Gm36595 10 56431507 to 56475415 43908 + lincRNA gene predicted gene, 36595
4930452L12Rik 10 56436354 to 56437603 1249 - lincRNA gene RIKEN cDNA 4930452L12 gene
Gm9118 10 56497341 to 56498094 753 + pseudogene predicted gene 9118
Tssr93374 10 56504495 to 56504520 25 + TSS region transcription start site region 93374
1700066D14Rik 10 56504500 to 56505286 786 unclassified gene RIKEN cDNA 1700066D14 gene
Tssr93375 10 56504521 to 56504535 14 + TSS region transcription start site region 93375
Tssr93376 10 56504550 to 56504559 9 + TSS region transcription start site region 93376
Cpgi1551 10 56504550 to 56504873 323 CpG island CpG island 1551
Tssr93377 10 56556087 to 56556091 4 + TSS region transcription start site region 93377
Tssr93378 10 56599427 to 56599438 11 + TSS region transcription start site region 93378
Cfq11 10 56604060 to 61105062 4501002 QTL conditioned fear QTL 11