Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:42320889-42551065

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Afg1l 10 42312585 to 42478565 165980 - protein coding gene AFG1 like ATPase
Gm15197 10 42330786 to 42331263 477 - pseudogene predicted gene 15197
Tssr3187 10 42334169 to 42334174 5 + TSS region transcription start site region 3187
Tssr93081 10 42349875 to 42349876 1 + TSS region transcription start site region 93081
D10Mit254 10 42361495 to 42361618 123 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 254
D10Mit184 10 42368699 to 42368826 127 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 184
Tssr97440 10 42388327 to 42388331 4 - TSS region transcription start site region 97440
Gm15198 10 42435889 to 42436065 176 + pseudogene predicted gene 15198
Tssr97441 10 42475070 to 42475085 15 - TSS region transcription start site region 97441
Tssr97442 10 42475101 to 42475119 18 - TSS region transcription start site region 97442
Cpgi1480 10 42478070 to 42478732 662 CpG island CpG island 1480
Tssr97443 10 42478399 to 42478443 44 - TSS region transcription start site region 97443
Tssr97444 10 42478488 to 42478503 15 - TSS region transcription start site region 97444
Gm25277 10 42493423 to 42493746 323 - unclassified non-coding RNA gene predicted gene, 25277
Cpgi1481 10 42501621 to 42503099 1478 CpG island CpG island 1481
Tssr93082 10 42502036 to 42502041 5 + TSS region transcription start site region 93082
Tssr93083 10 42502048 to 42502055 7 + TSS region transcription start site region 93083
Snx3 10 42502054 to 42535369 33315 + protein coding gene sorting nexin 3
Tssr93084 10 42502060 to 42502083 23 + TSS region transcription start site region 93084
Tssr93085 10 42502102 to 42502113 11 + TSS region transcription start site region 93085
Tssr93086 10 42502125 to 42502136 11 + TSS region transcription start site region 93086
Tssr93087 10 42502184 to 42502195 11 + TSS region transcription start site region 93087
Tssr93088 10 42502197 to 42502282 85 + TSS region transcription start site region 93088
Tssr97445 10 42502827 to 42502846 19 - TSS region transcription start site region 97445
Tssr93089 10 42533143 to 42533166 23 + TSS region transcription start site region 93089
Tssr93090 10 42533202 to 42533216 14 + TSS region transcription start site region 93090
Tssr93091 10 42534642 to 42534669 27 + TSS region transcription start site region 93091
Tssr93092 10 42534809 to 42534828 19 + TSS region transcription start site region 93092
Tssr93093 10 42534859 to 42534875 16 + TSS region transcription start site region 93093
Tssr93094 10 42534904 to 42534927 23 + TSS region transcription start site region 93094
Tssr93095 10 42534990 to 42535019 29 + TSS region transcription start site region 93095
Tssr93096 10 42535042 to 42535053 11 + TSS region transcription start site region 93096
Tssr93097 10 42535096 to 42535120 24 + TSS region transcription start site region 93097