MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:42237436-42284809

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Foxo3	10	42181845 to 42276746	94901	-	protein coding gene	forkhead box O3
D10Mit255	10	42238875 to 42239012	137		DNA segment	DNA Segment, Chr 10, Massachusetts Institute of Technology 255
Gm38485	10	42247436 to 42274809	27373	-	lncRNA gene	predicted gene, 38485
Tssr97429	10	42264202 to 42264212	10	-	TSS region	transcription start site region 97429
Tssr97430	10	42270341 to 42270346	5	-	TSS region	transcription start site region 97430
Tssr97431	10	42270921 to 42270941	20	-	TSS region	transcription start site region 97431
Tssr97432	10	42273921 to 42273943	22	-	TSS region	transcription start site region 97432
Tssr93078	10	42274080 to 42274098	18	+	TSS region	transcription start site region 93078
Cpgi1479	10	42274400 to 42278743	4343		CpG island	CpG island 1479
Tssr97433	10	42275624 to 42275652	28	-	TSS region	transcription start site region 97433
Tssr97434	10	42276645 to 42276656	11	-	TSS region	transcription start site region 97434
Tssr97435	10	42276665 to 42276681	16	-	TSS region	transcription start site region 97435
Tssr97436	10	42276688 to 42276743	55	-	TSS region	transcription start site region 97436
Tssr97437	10	42276744 to 42276763	19	-	TSS region	transcription start site region 97437
Gm33333	10	42276824 to 42286320	9496	+	lncRNA gene	predicted gene, 33333
Tssr93079	10	42276892 to 42276900	8	+	TSS region	transcription start site region 93079
Tssr97438	10	42277600 to 42277614	14	-	TSS region	transcription start site region 97438
Tssr97439	10	42277635 to 42277640	5	-	TSS region	transcription start site region 97439