Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:41919609-42260200

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Armc2 10 41914990 to 42018442 103452 - protein coding gene armadillo repeat containing 2
Tssr97422 10 41933759 to 41933770 11 - TSS region transcription start site region 97422
Gm17869 10 41943301 to 41943971 670 - pseudogene predicted gene, 17869
Gm33058 10 41958324 to 41975065 16741 + lncRNA gene predicted gene, 33058
Tssr93074 10 41959126 to 41959130 4 + TSS region transcription start site region 93074
Cpgi1477 10 42017880 to 42018627 747 CpG island CpG island 1477
Tssr93075 10 42018174 to 42018203 29 + TSS region transcription start site region 93075
1700016J18Rik 10 42018216 to 42018810 594 + bidirectional promoter lncRNA gene RIKEN cDNA 1700016J18 gene
Tssr97423 10 42018363 to 42018401 38 - TSS region transcription start site region 97423
D10Mit193 10 42029819 to 42029943 124 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 193
Cpgi1478 10 42031117 to 42031470 353 CpG island CpG island 1478
Gm40630 10 42041555 to 42081937 40382 - lncRNA gene predicted gene, 40630
Gm9855 10 42054113 to 42055306 1193 - pseudogene predicted pseudogene 9855
Tssr97424 10 42068606 to 42068617 11 - TSS region transcription start site region 97424
3110001L01Rik 10 42089609 to 42090200 591 unclassified gene RIKEN cDNA 3110001L01 gene
Tssr93076 10 42140937 to 42140952 15 + TSS region transcription start site region 93076
Foxo3 10 42181845 to 42276746 94901 - protein coding gene forkhead box O3
Tssr97425 10 42182228 to 42182252 24 - TSS region transcription start site region 97425
Tssr97426 10 42182447 to 42182451 4 - TSS region transcription start site region 97426
Tssr93077 10 42184372 to 42184373 1 + TSS region transcription start site region 93077
Tssr97427 10 42191999 to 42192015 16 - TSS region transcription start site region 97427
Tssr97428 10 42192019 to 42192038 19 - TSS region transcription start site region 97428
D10Mit255 10 42238875 to 42239012 137 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 255
Gm38485 10 42247436 to 42274809 27373 - lncRNA gene predicted gene, 38485