Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:39811149-40011800

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rev3l 10 39732118 to 39875211 143093 + protein coding gene REV3 like, DNA directed polymerase zeta catalytic subunit
Tssr93008 10 39822566 to 39822581 15 + TSS region transcription start site region 93008
Tssr93009 10 39823933 to 39823950 17 + TSS region transcription start site region 93009
A130048E20Rik 10 39856217 to 39858724 2507 unclassified gene RIKEN cDNA A130048E20 gene
Gm26824 10 39864859 to 39866332 1473 - lincRNA gene predicted gene, 26824
Mfsd4b4 10 39892760 to 39899238 6478 - protein coding gene major facilitator superfamily domain containing 4B4
Tssr97344 10 39894084 to 39894105 21 - TSS region transcription start site region 97344
Cpgi1449 10 39898719 to 39899431 712 CpG island CpG island 1449
Tssr97345 10 39899161 to 39899184 23 - TSS region transcription start site region 97345
Tssr97346 10 39899187 to 39899270 83 - TSS region transcription start site region 97346
4930547M16Rik 10 39899283 to 39907082 7799 + bidirectional promoter lncRNA gene RIKEN cDNA 4930547M16 gene
Tssr93010 10 39899304 to 39899352 48 + TSS region transcription start site region 93010
Gm8911 10 39911149 to 39911800 651 + pseudogene predicted gene 8911
Mfsd4b2-ps 10 39920382 to 39926923 6541 - pseudogene major facilitator superfamily domain containing 4B2, pseudogene
Cpgi1450 10 39926438 to 39927246 808 CpG island CpG island 1450
Tssr97347 10 39926928 to 39926944 16 - TSS region transcription start site region 97347
Gm31848 10 39936855 to 39939963 3108 + lncRNA gene predicted gene, 31848
Gm45962 10 39938944 to 39941938 2994 + pseudogene predicted gene, 45962
Mfsd4b3-ps 10 39946912 to 39960153 13241 - pseudogene major facilitator superfamily domain containing 4B3, pseudogene
Mfsd4b5 10 39958061 to 39986646 28585 - protein coding gene major facilitator superfamily domain containing 4B5
Cpgi1451 10 39959687 to 39960403 716 CpG island CpG island 1451
Tssr97348 10 39960144 to 39960162 18 - TSS region transcription start site region 97348
Tssr97349 10 39960172 to 39960187 15 - TSS region transcription start site region 97349
Tssr97350 10 39960195 to 39960233 38 - TSS region transcription start site region 97350
Tssr97351 10 39960243 to 39960283 40 - TSS region transcription start site region 97351
Tssr97352 10 39986595 to 39986608 13 - TSS region transcription start site region 97352
Tssr97353 10 39986614 to 39986623 9 - TSS region transcription start site region 97353
Tssr97354 10 39986625 to 39986648 23 - TSS region transcription start site region 97354
Mfsd4b1 10 40001575 to 40025268 23693 - protein coding gene major facilitator superfamily domain containing 4B1
Gm48839 10 40009555 to 40009936 381 + pseudogene predicted gene, 48839