Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:39050971-39263794

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lama4 10 38965515 to 39110188 144673 + protein coding gene laminin, alpha 4
Fam229b 10 39118804 to 39133914 15110 - protein coding gene family with sequence similarity 229, member B
Tssr97327 10 39122213 to 39122260 47 - TSS region transcription start site region 97327
Tssr97328 10 39122277 to 39122279 2 - TSS region transcription start site region 97328
Cpgi1445 10 39133771 to 39134357 586 CpG island CpG island 1445
Tssr97329 10 39133855 to 39133912 57 - TSS region transcription start site region 97329
Tssr97330 10 39133914 to 39133927 13 - TSS region transcription start site region 97330
Tssr92973 10 39133958 to 39133980 22 + TSS region transcription start site region 92973
Tube1 10 39133978 to 39151058 17080 + protein coding gene epsilon-tubulin 1
Tssr92974 10 39133981 to 39134031 50 + TSS region transcription start site region 92974
Tssr92975 10 39134050 to 39134066 16 + TSS region transcription start site region 92975
Tssr92976 10 39136937 to 39136963 26 + TSS region transcription start site region 92976
Ccn6 10 39150971 to 39163794 12823 - protein coding gene cellular communication network factor 6
Gm40625 10 39153231 to 39156244 3013 + lncRNA gene predicted gene, 40625
D030034A15Rik 10 39169300 to 39173252 3952 - lincRNA gene RIKEN cDNA D030034A15 gene
Cpgi1446 10 39171197 to 39171513 316 CpG island CpG island 1446
Tssr92977 10 39198433 to 39198442 9 + TSS region transcription start site region 92977
Gm6477 10 39198538 to 39199301 763 + pseudogene predicted gene 6477
Gm40626 10 39220646 to 39229693 9047 + lncRNA gene predicted gene, 40626
Tssr97331 10 39227764 to 39227765 1 - TSS region transcription start site region 97331
Gm31562 10 39245046 to 39255100 10054 + lincRNA gene predicted gene, 31562