Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 10:37139545-38983355

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41 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1441 10 37140272 to 37140552 280 CpG island CpG island 1441
Cpgi1442 10 37140622 to 37141191 569 CpG island CpG island 1442
Tssr97319 10 37140733 to 37140761 28 - TSS region transcription start site region 97319
Tssr97320 10 37140802 to 37140831 29 - TSS region transcription start site region 97320
Tssr97321 10 37140937 to 37140981 44 - TSS region transcription start site region 97321
5930403N24Rik 10 37141078 to 37151317 10239 + lncRNA gene RIKEN cDNA 5930403N24 gene
Tssr97322 10 37141275 to 37141289 14 - TSS region transcription start site region 97322
Tssr97323 10 37141305 to 37141328 23 - TSS region transcription start site region 97323
Tssr97324 10 37160496 to 37160503 7 - TSS region transcription start site region 97324
Tssr97325 10 37233311 to 37233321 10 - TSS region transcription start site region 97325
Tssr92964 10 37239043 to 37239046 3 + TSS region transcription start site region 92964
4930543K20Rik 10 37263394 to 37263748 354 - lincRNA gene RIKEN cDNA 4930543K20 gene
Tssr92965 10 37315385 to 37315390 5 + TSS region transcription start site region 92965
Gm26535 10 37319505 to 37338948 19443 + lincRNA gene predicted gene, 26535
Tssr97326 10 37321318 to 37321338 20 - TSS region transcription start site region 97326
Gm31202 10 37360698 to 37364361 3663 - lncRNA gene predicted gene, 31202
Gm31330 10 37430435 to 37436975 6540 - lncRNA gene predicted gene, 31330
Gm48172 10 37452452 to 37452680 228 - pseudogene predicted gene, 48172
Gm24710 10 37931680 to 37931780 100 + miRNA gene predicted gene, 24710
Gm46220 10 38059341 to 38063357 4016 + lncRNA gene predicted gene, 46220
2210408O09Rik 10 38059545 to 38063355 3810 unclassified non-coding RNA gene RIKEN cDNA 2210408O09 gene
Gm31378 10 38116245 to 38122061 5816 - lincRNA gene predicted gene, 31378
Tssr3181 10 38169832 to 38169834 2 + TSS region transcription start site region 3181
4930591E09Rik 10 38175780 to 38181903 6123 + lincRNA gene RIKEN cDNA 4930591E09 gene
Gm24889 10 38179453 to 38179584 131 + snoRNA gene predicted gene, 24889
Gm24297 10 38213359 to 38213426 67 + snoRNA gene predicted gene, 24297
Gm48173 10 38216579 to 38216872 293 - pseudogene predicted gene, 48173
Gm48197 10 38295074 to 38313846 18772 - lincRNA gene predicted gene, 48197
Gm40624 10 38354784 to 38382402 27618 + lncRNA gene predicted gene, 40624
Gm48198 10 38433979 to 38434135 156 - pseudogene predicted gene, 48198
Gm22911 10 38615375 to 38615481 106 - snRNA gene predicted gene, 22911
Rfpl4b 10 38820541 to 38821779 1238 - protein coding gene ret finger protein-like 4B
Gm17779 10 38928289 to 38928682 393 + pseudogene predicted gene, 17779
Tssr92966 10 38965192 to 38965201 9 + TSS region transcription start site region 92966
Cpgi1443 10 38965439 to 38966265 826 CpG island CpG island 1443
Lama4 10 38965515 to 39110188 144673 + protein coding gene laminin, alpha 4
Tssr92967 10 38965547 to 38965558 11 + TSS region transcription start site region 92967
Tssr92968 10 38965559 to 38965576 17 + TSS region transcription start site region 92968
Tssr92969 10 38965589 to 38965598 9 + TSS region transcription start site region 92969
Tssr92970 10 38965616 to 38965630 14 + TSS region transcription start site region 92970
Tssr92971 10 38966920 to 38966951 31 + TSS region transcription start site region 92971