Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:34919310-36789450

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr92945 10 35102619 to 35102620 1 + TSS region transcription start site region 92945
Gm26341 10 35112198 to 35112331 133 + snoRNA gene predicted gene, 26341
Gm47044 10 35142313 to 35142578 265 + pseudogene predicted gene, 47044
Gm18729 10 35242123 to 35242743 620 - pseudogene predicted gene, 18729
1700054O05Rik 10 35478827 to 35485396 6569 - lincRNA gene RIKEN cDNA 1700054O05 gene
Tssr97278 10 35485353 to 35485363 10 - TSS region transcription start site region 97278
Amd2 10 35708691 to 35711891 3200 - protein coding gene S-adenosylmethionine decarboxylase 2
Gm49446 10 35838490 to 35854475 15985 + lincRNA gene predicted gene, 49446
Gm31016 10 35838517 to 35846401 7884 + lncRNA gene predicted gene, 31016
Gm40623 10 35846471 to 35854217 7746 + lncRNA gene predicted gene, 40623
Gm47046 10 35849310 to 35859450 10140 - pseudogene predicted gene, 47046
Tssr3176 10 35911189 to 35911192 3 + TSS region transcription start site region 3176
Chol16 10 36039047 to 36039047 0 QTL cholesterol 16
Gm47048 10 36095876 to 36096495 619 + pseudogene predicted gene, 47048
Tssr92946 10 36148965 to 36148969 4 + TSS region transcription start site region 92946
Gm47049 10 36391592 to 36396928 5336 + lincRNA gene predicted gene, 47049
D10Mit156 10 36455282 to 36455410 128 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 156
Cpgi1437 10 36506535 to 36507762 1227 CpG island CpG island 1437
Hs3st5 10 36506814 to 36834397 327583 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 5
Tssr92947 10 36506834 to 36506846 12 + TSS region transcription start site region 92947
Tssr92948 10 36506907 to 36506921 14 + TSS region transcription start site region 92948
Tssr92949 10 36506950 to 36506997 47 + TSS region transcription start site region 92949
Tssr92950 10 36507013 to 36507024 11 + TSS region transcription start site region 92950
Tssr92951 10 36525387 to 36525392 5 + TSS region transcription start site region 92951
Gm47054 10 36611900 to 36614074 2174 - unclassified gene predicted gene, 47054
Tssr92952 10 36628235 to 36628248 13 + TSS region transcription start site region 92952
Tssr92953 10 36628263 to 36628280 17 + TSS region transcription start site region 92953
Tssr92954 10 36641083 to 36641087 4 + TSS region transcription start site region 92954
Tssr97279 10 36750191 to 36750196 5 - TSS region transcription start site region 97279
Gm22554 10 36775785 to 36775931 146 - snoRNA gene predicted gene, 22554