Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:34392123-36092743

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nt5dc1 10 34303609 to 34418589 114980 - protein coding gene 5'-nucleotidase domain containing 1
Col10a1 10 34389981 to 34397085 7104 + protein coding gene collagen, type X, alpha 1
Cpgi1436 10 34418192 to 34418771 579 CpG island CpG island 1436
Tssr97275 10 34418465 to 34418567 102 - TSS region transcription start site region 97275
Tssr92934 10 34456487 to 34456488 1 + TSS region transcription start site region 92934
Frk 10 34483400 to 34611232 127832 + protein coding gene fyn-related kinase
Tssr92935 10 34483415 to 34483445 30 + TSS region transcription start site region 92935
Tssr92936 10 34483450 to 34483479 29 + TSS region transcription start site region 92936
Tssr92937 10 34483517 to 34483533 16 + TSS region transcription start site region 92937
Tssr92938 10 34483546 to 34483599 53 + TSS region transcription start site region 92938
Tssr92939 10 34483630 to 34483644 14 + TSS region transcription start site region 92939
Tssr92940 10 34484846 to 34484850 4 + TSS region transcription start site region 92940
Gm19162 10 34646912 to 34647634 722 - pseudogene predicted gene, 19162
Tssr3175 10 34673597 to 34673603 6 + TSS region transcription start site region 3175
Tssr97276 10 34713524 to 34713526 2 - TSS region transcription start site region 97276
Tssr92941 10 34787754 to 34787757 3 + TSS region transcription start site region 92941
Gm18252 10 34881457 to 34882160 703 + pseudogene predicted gene, 18252
Tssr97277 10 34882406 to 34882410 4 - TSS region transcription start site region 97277
Tssr92942 10 34898222 to 34898229 7 + TSS region transcription start site region 92942
Gm8834 10 34898256 to 34898820 564 + pseudogene predicted gene 8834
Tssr92943 10 34898697 to 34898710 13 + TSS region transcription start site region 92943
Tssr92944 10 34898777 to 34898784 7 + TSS region transcription start site region 92944
Tssr92945 10 35102619 to 35102620 1 + TSS region transcription start site region 92945
Gm26341 10 35112198 to 35112331 133 + snoRNA gene predicted gene, 26341
Gm47044 10 35142313 to 35142578 265 + pseudogene predicted gene, 47044
Gm18729 10 35242123 to 35242743 620 - pseudogene predicted gene, 18729
1700054O05Rik 10 35478827 to 35485396 6569 - lincRNA gene RIKEN cDNA 1700054O05 gene
Tssr97278 10 35485353 to 35485363 10 - TSS region transcription start site region 97278
Amd2 10 35708691 to 35711891 3200 - protein coding gene S-adenosylmethionine decarboxylase 2
Gm49446 10 35838490 to 35854475 15985 + lincRNA gene predicted gene, 49446
Gm31016 10 35838517 to 35846401 7884 + lncRNA gene predicted gene, 31016
Gm40623 10 35846471 to 35854217 7746 + lncRNA gene predicted gene, 40623
Gm47046 10 35849310 to 35859450 10140 - pseudogene predicted gene, 47046
Tssr3176 10 35911189 to 35911192 3 + TSS region transcription start site region 3176
Chol16 10 36039047 to 36039047 0 QTL cholesterol 16