Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:18643469-18937979

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arfgef3 10 18588011 to 18743758 155747 - protein coding gene ARFGEF family member 3
Tssr96840 10 18653731 to 18653737 6 - TSS region transcription start site region 96840
Tssr96841 10 18679088 to 18679091 3 - TSS region transcription start site region 96841
Cpgi1336 10 18743459 to 18744018 559 CpG island CpG island 1336
Gm32926 10 18743469 to 18837979 94510 + antisense lncRNA gene predicted gene, 32926
Tssr96842 10 18743672 to 18743684 12 - TSS region transcription start site region 96842
Tssr96843 10 18743691 to 18743760 69 - TSS region transcription start site region 96843
Tssr96844 10 18743911 to 18743972 61 - TSS region transcription start site region 96844
Gm4922 10 18779727 to 18786793 7066 - protein coding gene predicted gene 4922
Tssr96845 10 18786778 to 18786789 11 - TSS region transcription start site region 96845
Tssr96846 10 18789473 to 18789474 1 - TSS region transcription start site region 96846
4930444F02Rik 10 18797299 to 18831930 34631 - lincRNA gene RIKEN cDNA 4930444F02 gene
Tssr96847 10 18800435 to 18800440 5 - TSS region transcription start site region 96847
Tssr96848 10 18805066 to 18805070 4 - TSS region transcription start site region 96848
D10Mit168 10 18806716 to 18806860 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 168
Tssr96849 10 18831814 to 18831825 11 - TSS region transcription start site region 96849
Tssr96850 10 18831900 to 18831913 13 - TSS region transcription start site region 96850
Tssr96851 10 18831916 to 18831941 25 - TSS region transcription start site region 96851
Cpgi1337 10 18844513 to 18845547 1034 CpG island CpG island 1337
Tssr92499 10 18844966 to 18844977 11 + TSS region transcription start site region 92499
Tssr92500 10 18845012 to 18845023 11 + TSS region transcription start site region 92500
Tssr92501 10 18845056 to 18845067 11 + TSS region transcription start site region 92501
Perp 10 18845071 to 18857073 12002 + protein coding gene PERP, TP53 apoptosis effector
Tssr92502 10 18845075 to 18845082 7 + TSS region transcription start site region 92502
Tssr92503 10 18845096 to 18845112 16 + TSS region transcription start site region 92503
Tssr92504 10 18845124 to 18845139 15 + TSS region transcription start site region 92504
Tssr96852 10 18848021 to 18848032 11 - TSS region transcription start site region 96852
Tssr96853 10 18848063 to 18848070 7 - TSS region transcription start site region 96853
Tssr92505 10 18853567 to 18853618 51 + TSS region transcription start site region 92505
Tssr92506 10 18855787 to 18855816 29 + TSS region transcription start site region 92506
Gm48483 10 18879735 to 18887029 7294 - lincRNA gene predicted gene, 48483
Tssr92507 10 18917272 to 18917290 18 + TSS region transcription start site region 92507