Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:13105226-13305645

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plagl1 10 13090788 to 13131694 40906 + protein coding gene pleiomorphic adenoma gene-like 1
Tssr92382 10 13108818 to 13108822 4 + TSS region transcription start site region 92382
Tssr92383 10 13109390 to 13109393 3 + TSS region transcription start site region 92383
2610311E24Rik 10 13115489 to 13116143 654 unclassified non-coding RNA gene RIKEN cDNA 2610311E24 gene
Tssr92384 10 13124951 to 13124965 14 + TSS region transcription start site region 92384
Cpgi1309 10 13127202 to 13127522 320 CpG island CpG island 1309
Tssr92385 10 13129017 to 13129051 34 + TSS region transcription start site region 92385
Tssr92386 10 13129575 to 13129584 9 + TSS region transcription start site region 92386
Tssr92387 10 13129825 to 13129856 31 + TSS region transcription start site region 92387
Tssr92388 10 13130023 to 13130059 36 + TSS region transcription start site region 92388
Tssr92389 10 13130316 to 13130337 21 + TSS region transcription start site region 92389
Tssr92390 10 13130593 to 13130639 46 + TSS region transcription start site region 92390
Zc2hc1b 10 13149644 to 13178038 28394 - protein coding gene zinc finger, C2HC-type containing 1B
Tssr96744 10 13177989 to 13178004 15 - TSS region transcription start site region 96744
Ltv1 10 13178597 to 13193137 14540 - protein coding gene LTV1 ribosome biogenesis factor
Tssr96745 10 13182411 to 13182444 33 - TSS region transcription start site region 96745
Cpgi1310 10 13192720 to 13193332 612 CpG island CpG island 1310
Tssr96746 10 13192730 to 13192800 70 - TSS region transcription start site region 96746
Tssr96747 10 13193069 to 13193076 7 - TSS region transcription start site region 96747
Tssr96748 10 13193096 to 13193155 59 - TSS region transcription start site region 96748
Tssr96749 10 13193156 to 13193167 11 - TSS region transcription start site region 96749
Gm47402 10 13205226 to 13205645 419 + pseudogene predicted gene, 47402
Phactr2 10 13207717 to 13474412 266695 - protein coding gene phosphatase and actin regulator 2
Tssr96750 10 13209934 to 13209937 3 - TSS region transcription start site region 96750
Gm46211 10 13224869 to 13227608 2739 + lncRNA gene predicted gene, 46211
Tssr96751 10 13292038 to 13292071 33 - TSS region transcription start site region 96751
Tssr96752 10 13301107 to 13301116 9 - TSS region transcription start site region 96752
Tssr96753 10 13303970 to 13303977 7 - TSS region transcription start site region 96753
Tssr92391 10 13304114 to 13304127 13 + TSS region transcription start site region 92391
Tssr96754 10 13304719 to 13304754 35 - TSS region transcription start site region 96754
Tssr92392 10 13304957 to 13304982 25 + TSS region transcription start site region 92392