Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128684014-128804085

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab5b 10 128677175 to 128696264 19089 - protein coding gene RAB5B, member RAS oncogene family
Cpgi2415 10 128695739 to 128696598 859 CpG island CpG island 2415
Tssr99924 10 128695991 to 128696003 12 - TSS region transcription start site region 99924
Tssr99925 10 128696010 to 128696065 55 - TSS region transcription start site region 99925
Tssr99926 10 128696183 to 128696190 7 - TSS region transcription start site region 99926
Tssr99927 10 128696214 to 128696256 42 - TSS region transcription start site region 99927
Tssr99928 10 128696257 to 128696273 16 - TSS region transcription start site region 99928
Cdk2 10 128697939 to 128705031 7092 - protein coding gene cyclin-dependent kinase 2
Tssr99929 10 128698101 to 128698106 5 - TSS region transcription start site region 99929
Tssr3400 10 128704180 to 128704186 6 + TSS region transcription start site region 3400
Tssr99930 10 128704285 to 128704311 26 - TSS region transcription start site region 99930
Cpgi2416 10 128704419 to 128705262 843 CpG island CpG island 2416
Tssr99931 10 128704947 to 128704975 28 - TSS region transcription start site region 99931
Tssr99932 10 128704978 to 128705049 71 - TSS region transcription start site region 99932
Pmel 10 128705144 to 128720238 15094 + protein coding gene premelanosome protein
Tssr96436 10 128705174 to 128705209 35 + TSS region transcription start site region 96436
Tssr96437 10 128706251 to 128706264 13 + TSS region transcription start site region 96437
Dgka 10 128720134 to 128744855 24721 - protein coding gene diacylglycerol kinase, alpha
Tssr96438 10 128720134 to 128720145 11 + TSS region transcription start site region 96438
Tssr96439 10 128720234 to 128720255 21 + TSS region transcription start site region 96439
Tssr99933 10 128720321 to 128720337 16 - TSS region transcription start site region 99933
Tssr99934 10 128720713 to 128720716 3 - TSS region transcription start site region 99934
Tssr99935 10 128721219 to 128721223 4 - TSS region transcription start site region 99935
Tssr99936 10 128734447 to 128734452 5 - TSS region transcription start site region 99936
Cpgi2417 10 128737541 to 128737733 192 CpG island CpG island 2417
Tssr99937 10 128737576 to 128737589 13 - TSS region transcription start site region 99937
Tssr99938 10 128737598 to 128737616 18 - TSS region transcription start site region 99938
Tssr99939 10 128740099 to 128740109 10 - TSS region transcription start site region 99939
Tssr99940 10 128742712 to 128742719 7 - TSS region transcription start site region 99940
Cpgi2418 10 128743597 to 128744223 626 CpG island CpG island 2418
Tssr99941 10 128743833 to 128743845 12 - TSS region transcription start site region 99941
Tssr99942 10 128743869 to 128743910 41 - TSS region transcription start site region 99942
Tssr99943 10 128743961 to 128743972 11 - TSS region transcription start site region 99943
Tssr99944 10 128743984 to 128743995 11 - TSS region transcription start site region 99944
Tssr99945 10 128744014 to 128744085 71 - TSS region transcription start site region 99945
Tssr99946 10 128744091 to 128744109 18 - TSS region transcription start site region 99946
Tssr99947 10 128744240 to 128744252 12 - TSS region transcription start site region 99947
Tssr99948 10 128744265 to 128744282 17 - TSS region transcription start site region 99948
Tssr96440 10 128744793 to 128744822 29 + TSS region transcription start site region 96440
Tssr99949 10 128744846 to 128744887 41 - TSS region transcription start site region 99949
Tssr96441 10 128744937 to 128745023 86 + TSS region transcription start site region 96441
Gm31504 10 128745034 to 128745882 848 + lncRNA gene predicted gene, 31504
Tssr99950 10 128745046 to 128745058 12 - TSS region transcription start site region 99950
Tssr99951 10 128745069 to 128745081 12 - TSS region transcription start site region 99951
Tssr99952 10 128745082 to 128745085 3 - TSS region transcription start site region 99952
Tssr99953 10 128745087 to 128745122 35 - TSS region transcription start site region 99953
Tssr96442 10 128745193 to 128745234 41 + TSS region transcription start site region 96442
Tssr99954 10 128745445 to 128745466 21 - TSS region transcription start site region 99954
Tssr99955 10 128745478 to 128745499 21 - TSS region transcription start site region 99955
Tssr99956 10 128746233 to 128746252 19 - TSS region transcription start site region 99956
Tssr99957 10 128746300 to 128746312 12 - TSS region transcription start site region 99957
Tssr96443 10 128746457 to 128746474 17 + TSS region transcription start site region 96443
Tssr99958 10 128747628 to 128747645 17 - TSS region transcription start site region 99958
Cpgi2419 10 128747702 to 128748742 1040 CpG island CpG island 2419
Tssr99959 10 128747720 to 128747744 24 - TSS region transcription start site region 99959
Tssr96444 10 128747788 to 128747799 11 + TSS region transcription start site region 96444
Tssr96445 10 128747850 to 128747895 45 + TSS region transcription start site region 96445
Pym1 10 128747889 to 128766564 18675 + protein coding gene PYM homolog 1, exon junction complex associated factor
Tssr96446 10 128748501 to 128748538 37 + TSS region transcription start site region 96446
Tssr96447 10 128748751 to 128748783 32 + TSS region transcription start site region 96447
Rpsa-ps2 10 128776371 to 128777250 879 - pseudogene ribosomal protein SA, pseudogene 2
Gm47093 10 128789429 to 128801393 11964 - antisense lncRNA gene predicted gene, 47093
Tssr96448 10 128790903 to 128790968 65 + TSS region transcription start site region 96448
Mmp19 10 128790910 to 128800824 9914 + protein coding gene matrix metallopeptidase 19
Tssr96449 10 128798942 to 128798979 37 + TSS region transcription start site region 96449
Tssr96450 10 128799957 to 128799991 34 + TSS region transcription start site region 96450
Tmem198b 10 128800036 to 128804370 4334 - protein coding gene transmembrane protein 198b
Tssr99960 10 128803946 to 128803995 49 - TSS region transcription start site region 99960