Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:127648872-127688883

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stat6 10 127642986 to 127660957 17971 + protein coding gene signal transducer and activator of transcription 6
Gm30989 10 127648256 to 127650695 2439 - lncRNA gene predicted gene, 30989
Tssr96236 10 127658221 to 127658229 8 + TSS region transcription start site region 96236
Tssr96237 10 127658324 to 127658331 7 + TSS region transcription start site region 96237
Tssr96238 10 127658351 to 127658384 33 + TSS region transcription start site region 96238
Nab2 10 127660918 to 127666703 5785 - protein coding gene Ngfi-A binding protein 2
Tssr99809 10 127661415 to 127661424 9 - TSS region transcription start site region 99809
Tssr99810 10 127661435 to 127661458 23 - TSS region transcription start site region 99810
Tssr99811 10 127661653 to 127661667 14 - TSS region transcription start site region 99811
Cpgi2370 10 127662705 to 127662900 195 CpG island CpG island 2370
Tssr99812 10 127663470 to 127663481 11 - TSS region transcription start site region 99812
Gm16229 10 127663839 to 127665484 1645 + antisense lncRNA gene predicted gene 16229
Cpgi2371 10 127666067 to 127667815 1748 CpG island CpG island 2371
Tssr99813 10 127666598 to 127666623 25 - TSS region transcription start site region 99813
Tssr99814 10 127666673 to 127666746 73 - TSS region transcription start site region 99814
Tssr99815 10 127666784 to 127666817 33 - TSS region transcription start site region 99815
Tssr99816 10 127666894 to 127666937 43 - TSS region transcription start site region 99816
Tssr96239 10 127667117 to 127667142 25 + TSS region transcription start site region 96239
1700012D01Rik 10 127667123 to 127668851 1728 + lncRNA gene RIKEN cDNA 1700012D01 gene
Tssr96240 10 127667155 to 127667174 19 + TSS region transcription start site region 96240
Tssr99817 10 127667583 to 127667610 27 - TSS region transcription start site region 99817
Tssr99818 10 127667649 to 127667665 16 - TSS region transcription start site region 99818
Cpgi2372 10 127667991 to 127668461 470 CpG island CpG island 2372
Tssr96241 10 127668391 to 127668409 18 + TSS region transcription start site region 96241
Tssr99819 10 127668521 to 127668589 68 - TSS region transcription start site region 99819
Tssr99820 10 127668872 to 127668883 11 - TSS region transcription start site region 99820
Gm16230 10 127671604 to 127676724 5120 - antisense lncRNA gene predicted gene 16230
Tssr3394 10 127676724 to 127676761 37 - TSS region transcription start site region 3394
Cpgi2373 10 127676748 to 127677685 937 CpG island CpG island 2373
Tssr96242 10 127677043 to 127677059 16 + TSS region transcription start site region 96242
Tssr96243 10 127677064 to 127677099 35 + TSS region transcription start site region 96243
Nemp1 10 127677065 to 127701049 23984 + protein coding gene nuclear envelope integral membrane protein 1