Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:127020265-127130325

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Avil 10 127000709 to 127020994 20285 + protein coding gene advillin
Tsfm 10 127022332 to 127030814 8482 - protein coding gene Ts translation elongation factor, mitochondrial
Cpgi2329 10 127030356 to 127031002 646 CpG island CpG island 2329
Tssr99703 10 127030789 to 127030812 23 - TSS region transcription start site region 99703
Tssr99704 10 127030813 to 127030838 25 - TSS region transcription start site region 99704
Eef1akmt3 10 127032806 to 127042026 9220 - protein coding gene EEF1A lysine methyltransferase 3
Cpgi2330 10 127040823 to 127042270 1447 CpG island CpG island 2330
Mettl1 10 127041643 to 127046365 4722 + protein coding gene methyltransferase like 1
Tssr96106 10 127041931 to 127041972 41 + TSS region transcription start site region 96106
Tssr96107 10 127048235 to 127048246 11 + TSS region transcription start site region 96107
Cyp27b1 10 127048250 to 127053006 4756 + protein coding gene cytochrome P450, family 27, subfamily b, polypeptide 1
Cpgi2331 10 127048950 to 127050272 1322 CpG island CpG island 2331
March9 10 127056050 to 127060184 4134 - protein coding gene membrane-associated ring finger (C3HC4) 9
Cpgi2332 10 127059150 to 127060808 1658 CpG island CpG island 2332
Tssr96108 10 127059358 to 127059371 13 + TSS region transcription start site region 96108
Tssr99705 10 127060135 to 127060148 13 - TSS region transcription start site region 99705
Tssr99706 10 127060163 to 127060206 43 - TSS region transcription start site region 99706
Tssr99707 10 127060258 to 127060306 48 - TSS region transcription start site region 99707
Tssr99708 10 127060338 to 127060387 49 - TSS region transcription start site region 99708
Cpgi2333 10 127063241 to 127064393 1152 CpG island CpG island 2333
Tssr96109 10 127063527 to 127063538 11 + TSS region transcription start site region 96109
Cdk4 10 127063535 to 127067288 3753 + protein coding gene cyclin-dependent kinase 4
Tssr96110 10 127063548 to 127063597 49 + TSS region transcription start site region 96110
Tssr96111 10 127063599 to 127063655 56 + TSS region transcription start site region 96111
Tssr96112 10 127063656 to 127063670 14 + TSS region transcription start site region 96112
Tssr96113 10 127064206 to 127064244 38 + TSS region transcription start site region 96113
Tssr96114 10 127064286 to 127064310 24 + TSS region transcription start site region 96114
Tssr96115 10 127066154 to 127066182 28 + TSS region transcription start site region 96115
Tssr96116 10 127067086 to 127067107 21 + TSS region transcription start site region 96116
Tssr96117 10 127067168 to 127067181 13 + TSS region transcription start site region 96117
Tspan31 10 127067290 to 127070261 2971 - protein coding gene tetraspanin 31
Tssr99709 10 127067517 to 127067538 21 - TSS region transcription start site region 99709
Tssr99710 10 127067632 to 127067660 28 - TSS region transcription start site region 99710
Tssr99711 10 127067732 to 127067760 28 - TSS region transcription start site region 99711
Tssr99712 10 127067826 to 127067842 16 - TSS region transcription start site region 99712
Tssr99713 10 127069096 to 127069109 13 - TSS region transcription start site region 99713
Cpgi2334 10 127070118 to 127071073 955 CpG island CpG island 2334
Tssr99714 10 127070232 to 127070249 17 - TSS region transcription start site region 99714
Tssr99715 10 127070254 to 127070302 48 - TSS region transcription start site region 99715
Tssr96118 10 127070374 to 127070421 47 + TSS region transcription start site region 96118
A730063M14Rik 10 127070481 to 127071101 620 + lincRNA gene RIKEN cDNA A730063M14 gene
Tssr96119 10 127075265 to 127075325 60 + TSS region transcription start site region 96119
Agap2 10 127075284 to 127093169 17885 + protein coding gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
Tssr96120 10 127075329 to 127075398 69 + TSS region transcription start site region 96120
Tssr96121 10 127078886 to 127078918 32 + TSS region transcription start site region 96121
Tssr96122 10 127078922 to 127078946 24 + TSS region transcription start site region 96122
Cpgi2335 10 127078930 to 127080637 1707 CpG island CpG island 2335
Tssr96123 10 127078964 to 127078965 1 + TSS region transcription start site region 96123
Tssr96124 10 127078988 to 127078991 3 + TSS region transcription start site region 96124
Tssr96125 10 127079006 to 127079024 18 + TSS region transcription start site region 96125
Tssr96126 10 127079034 to 127079035 1 + TSS region transcription start site region 96126
Tssr96127 10 127079040 to 127079069 29 + TSS region transcription start site region 96127
Tssr96128 10 127079115 to 127079127 12 + TSS region transcription start site region 96128
Tssr96129 10 127079159 to 127079170 11 + TSS region transcription start site region 96129
Cpgi2336 10 127081174 to 127081762 588 CpG island CpG island 2336
Tssr96130 10 127084581 to 127084586 5 + TSS region transcription start site region 96130
Tssr96131 10 127084656 to 127084673 17 + TSS region transcription start site region 96131
Tssr96132 10 127084726 to 127084746 20 + TSS region transcription start site region 96132
Tssr96133 10 127086896 to 127086906 10 + TSS region transcription start site region 96133
Cpgi2337 10 127090578 to 127092210 1632 CpG island CpG island 2337
Tssr96134 10 127092667 to 127092688 21 + TSS region transcription start site region 96134
Tssr96135 10 127093037 to 127093041 4 + TSS region transcription start site region 96135
Os9 10 127095650 to 127121131 25481 - protein coding gene amplified in osteosarcoma
Gm16491 10 127097704 to 127101167 3463 unclassified gene predicted gene 16491
Gm40799 10 127107362 to 127113573 6211 - lncRNA gene predicted gene, 40799
Cpgi2338 10 127120485 to 127121377 892 CpG island CpG island 2338
Tssr99716 10 127121125 to 127121149 24 - TSS region transcription start site region 99716
Tssr96136 10 127129581 to 127129603 22 + TSS region transcription start site region 96136
Tssr96137 10 127129640 to 127129652 12 + TSS region transcription start site region 96137