Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:115402460-116232489

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfc3h1 10 115384959 to 115432772 47813 + protein coding gene zinc finger, C3H1-type containing
Tssr95820 10 115408862 to 115408874 12 + TSS region transcription start site region 95820
Tssr95821 10 115411386 to 115411392 6 + TSS region transcription start site region 95821
Tssr95822 10 115422333 to 115422338 5 + TSS region transcription start site region 95822
Tssr95823 10 115427319 to 115427332 13 + TSS region transcription start site region 95823
Tssr95824 10 115430881 to 115430905 24 + TSS region transcription start site region 95824
Tssr95825 10 115430906 to 115430921 15 + TSS region transcription start site region 95825
Tssr95826 10 115430937 to 115430946 9 + TSS region transcription start site region 95826
Tssr95827 10 115431069 to 115431081 12 + TSS region transcription start site region 95827
Lgr5 10 115450314 to 115587780 137466 - protein coding gene leucine rich repeat containing G protein coupled receptor 5
Tssr95828 10 115452583 to 115452588 5 + TSS region transcription start site region 95828
Cpgi2207 10 115452715 to 115453054 339 CpG island CpG island 2207
Tssr99336 10 115505646 to 115505661 15 - TSS region transcription start site region 99336
Tssr3359 10 115556867 to 115556874 7 + TSS region transcription start site region 3359
Tssr99337 10 115569746 to 115569750 4 - TSS region transcription start site region 99337
A930009A15Rik 10 115569986 to 115582448 12462 + protein coding gene RIKEN cDNA A930009A15 gene
Tssr95829 10 115570009 to 115570035 26 + TSS region transcription start site region 95829
Tssr95830 10 115570041 to 115570055 14 + TSS region transcription start site region 95830
Cpgi2208 10 115586905 to 115588040 1135 CpG island CpG island 2208
Tssr99338 10 115587739 to 115587768 29 - TSS region transcription start site region 99338
Gm8960 10 115598984 to 115599788 804 - pseudogene predicted gene 8960
Cpgi2209 10 115664540 to 115664772 232 CpG island CpG island 2209
D10Mit100 10 115674572 to 115674687 115 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 100
Tssr3360 10 115764035 to 115764036 1 + TSS region transcription start site region 3360
Tspan8 10 115816832 to 115849893 33061 + protein coding gene tetraspanin 8
Tssr95831 10 115817130 to 115817141 11 + TSS region transcription start site region 95831
Tssr3361 10 115817179 to 115817188 9 + TSS region transcription start site region 3361
Tssr95832 10 115817247 to 115817323 76 + TSS region transcription start site region 95832
Tssr95833 10 115817327 to 115817342 15 + TSS region transcription start site region 95833
Tssr95834 10 115817356 to 115817369 13 + TSS region transcription start site region 95834
Tssr95835 10 115817441 to 115817454 13 + TSS region transcription start site region 95835
Tssr95836 10 115817460 to 115817489 29 + TSS region transcription start site region 95836
Tssr95837 10 115817499 to 115817514 15 + TSS region transcription start site region 95837
Tssr95838 10 115817524 to 115817533 9 + TSS region transcription start site region 95838
Tssr95839 10 115833039 to 115833042 3 + TSS region transcription start site region 95839
Tssr95840 10 115846317 to 115846329 12 + TSS region transcription start site region 95840
4930422I22Rik 10 115849800 to 115869091 19291 - antisense lncRNA gene RIKEN cDNA 4930422I22 gene
Ptprr 10 116018213 to 116274932 256719 + protein coding gene protein tyrosine phosphatase, receptor type, R
Tssr95841 10 116018352 to 116018421 69 + TSS region transcription start site region 95841
Cpgi2210 10 116018364 to 116018793 429 CpG island CpG island 2210
Tssr95842 10 116018426 to 116018440 14 + TSS region transcription start site region 95842
Tssr95843 10 116018444 to 116018454 10 + TSS region transcription start site region 95843
Tssr99339 10 116098640 to 116098648 8 - TSS region transcription start site region 99339
Taf7l2 10 116111664 to 116113917 2253 - protein coding gene Taf7l2
Cpgi2211 10 116113312 to 116114405 1093 CpG island CpG island 2211
Tssr99340 10 116113874 to 116113880 6 - TSS region transcription start site region 99340
Tssr99341 10 116113889 to 116113933 44 - TSS region transcription start site region 99341
Tssr99342 10 116113934 to 116113941 7 - TSS region transcription start site region 99342
Tssr99343 10 116113944 to 116113949 5 - TSS region transcription start site region 99343
Tssr99344 10 116113952 to 116113957 5 - TSS region transcription start site region 99344
Tssr99345 10 116114241 to 116114263 22 - TSS region transcription start site region 99345
Tssr99346 10 116114264 to 116114279 15 - TSS region transcription start site region 99346
Tssr99347 10 116114283 to 116114299 16 - TSS region transcription start site region 99347
Tssr95844 10 116143881 to 116143902 21 + TSS region transcription start site region 95844
Tssr95845 10 116143910 to 116143922 12 + TSS region transcription start site region 95845
Tssr95846 10 116143942 to 116143952 10 + TSS region transcription start site region 95846
Tssr99348 10 116176962 to 116176968 6 - TSS region transcription start site region 99348
Tssr95847 10 116177217 to 116177243 26 + TSS region transcription start site region 95847
Tssr95848 10 116177393 to 116177417 24 + TSS region transcription start site region 95848
Tssr3362 10 116177423 to 116177434 11 + TSS region transcription start site region 3362
Tssr95849 10 116177683 to 116177700 17 + TSS region transcription start site region 95849
Tssr95850 10 116177702 to 116177763 61 + TSS region transcription start site region 95850
Tssr95851 10 116187685 to 116187688 3 + TSS region transcription start site region 95851