Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:107647374-108177384

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36177 10 107495268 to 107659403 164135 + lncRNA gene predicted gene, 36177
Ptprq 10 107517049 to 107720051 203002 - protein coding gene protein tyrosine phosphatase, receptor type, Q
Tssr3345 10 107705216 to 107705219 3 + TSS region transcription start site region 3345
Tssr99193 10 107719893 to 107719900 7 - TSS region transcription start site region 99193
Tssr99194 10 107719907 to 107719957 50 - TSS region transcription start site region 99194
Tssr3346 10 107719975 to 107719978 3 - TSS region transcription start site region 3346
Tssr99195 10 107719978 to 107719989 11 - TSS region transcription start site region 99195
Otogl 10 107760531 to 107912134 151603 - protein coding gene otogelin-like
Tssr99196 10 107876535 to 107876536 1 - TSS region transcription start site region 99196
Tssr99197 10 107912253 to 107912262 9 - TSS region transcription start site region 99197
Tssr99198 10 107912277 to 107912284 7 - TSS region transcription start site region 99198
Tssr99199 10 107912322 to 107912334 12 - TSS region transcription start site region 99199
Tssr99200 10 107912336 to 107912357 21 - TSS region transcription start site region 99200
Tssr99201 10 107912362 to 107912367 5 - TSS region transcription start site region 99201
Tssr99202 10 107912374 to 107912384 10 - TSS region transcription start site region 99202
Tssr99203 10 107912439 to 107912444 5 - TSS region transcription start site region 99203
Gm29685 10 107946645 to 107977832 31187 + lincRNA gene predicted gene, 29685
D10Ertd43e 10 108089921 to 108090127 206 DNA segment DNA segment, Chr 10, ERATO Doi 43, expressed
Tssr95651 10 108131087 to 108131112 25 + TSS region transcription start site region 95651
Gm47999 10 108141688 to 108142432 744 - pseudogene predicted gene, 47999
Gm40754 10 108150495 to 108160437 9942 - lncRNA gene predicted gene, 40754
Cpgi2173 10 108155057 to 108155306 249 CpG island CpG island 2173
Cpgi2174 10 108161490 to 108163074 1584 CpG island CpG island 2174
Ppp1r12a 10 108161831 to 108279833 118002 + protein coding gene protein phosphatase 1, regulatory subunit 12A
Tssr95652 10 108162044 to 108162053 9 + TSS region transcription start site region 95652
Tssr95653 10 108162080 to 108162112 32 + TSS region transcription start site region 95653
Tssr95654 10 108162113 to 108162125 12 + TSS region transcription start site region 95654
Tssr95655 10 108162145 to 108162169 24 + TSS region transcription start site region 95655
Tssr95656 10 108162174 to 108162177 3 + TSS region transcription start site region 95656
Tssr95657 10 108162180 to 108162216 36 + TSS region transcription start site region 95657
Tssr95658 10 108162270 to 108162279 9 + TSS region transcription start site region 95658
Tssr95659 10 108162302 to 108162314 12 + TSS region transcription start site region 95659
Tssr95660 10 108162358 to 108162408 50 + TSS region transcription start site region 95660
Tssr95661 10 108177299 to 108177303 4 + TSS region transcription start site region 95661