Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:9729104-9789112

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vcpip1 1 9718622 to 9748382 29760 - protein coding gene valosin containing protein (p97)/p47 complex interacting protein 1
Tssr10934 1 9736594 to 9736597 3 - TSS region transcription start site region 10934
Tssr10935 1 9745571 to 9745598 27 - TSS region transcription start site region 10935
Tssr10936 1 9746493 to 9746513 20 - TSS region transcription start site region 10936
Cpgi26 1 9747453 to 9748748 1295 CpG island CpG island 26
1700034P13Rik 1 9747648 to 9771256 23608 + antisense lncRNA gene RIKEN cDNA 1700034P13 gene
Tssr10937 1 9748227 to 9748243 16 - TSS region transcription start site region 10937
Tssr10938 1 9748247 to 9748272 25 - TSS region transcription start site region 10938
Tssr10939 1 9748277 to 9748320 43 - TSS region transcription start site region 10939
Tssr10940 1 9748330 to 9748353 23 - TSS region transcription start site region 10940
Tssr10941 1 9748355 to 9748367 12 - TSS region transcription start site region 10941
Tssr10942 1 9748376 to 9748451 75 - TSS region transcription start site region 10942
D1Mit296 1 9749730 to 9749873 143 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 296
D1Mit58 1 9757119 to 9757372 253 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 58
D1Mit58.2 1 9757246 to 9757363 117 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 58.2
Tssr5907 1 9759104 to 9759112 8 + TSS region transcription start site region 5907
Gm39590 1 9775558 to 9791319 15761 + lncRNA gene predicted gene, 39590
Tssr5908 1 9783723 to 9783735 12 + TSS region transcription start site region 5908
Tssr5909 1 9788396 to 9788407 11 + TSS region transcription start site region 5909
Tssr5910 1 9788409 to 9788420 11 + TSS region transcription start site region 5910