Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:87685810-87826740

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Inpp5d 1 87620312 to 87720507 100195 + protein coding gene inositol polyphosphate-5-phosphatase D
Tssr7881 1 87694864 to 87694870 6 + TSS region transcription start site region 7881
Tssr7882 1 87698146 to 87698157 11 + TSS region transcription start site region 7882
Gm33470 1 87699779 to 87724892 25113 - lncRNA gene predicted gene, 33470
Tssr7883 1 87700397 to 87700406 9 + TSS region transcription start site region 7883
Tssr7884 1 87701085 to 87701093 8 + TSS region transcription start site region 7884
Tssr7885 1 87701150 to 87701168 18 + TSS region transcription start site region 7885
Tssr7886 1 87701196 to 87701197 1 + TSS region transcription start site region 7886
Tssr7887 1 87701243 to 87701252 9 + TSS region transcription start site region 7887
Tssr7888 1 87701259 to 87701265 6 + TSS region transcription start site region 7888
Tssr7889 1 87702323 to 87702373 50 + TSS region transcription start site region 7889
Tssr7890 1 87716971 to 87716975 4 + TSS region transcription start site region 7890
Gm33517 1 87728270 to 87740862 12592 - lncRNA gene predicted gene, 33517
Cpgi533 1 87755810 to 87756740 930 CpG island CpG island 533
Tssr7891 1 87756004 to 87756115 111 + TSS region transcription start site region 7891
Atg16l1 1 87756006 to 87792428 36422 + protein coding gene autophagy related 16-like 1 (S. cerevisiae)
Tssr7892 1 87766101 to 87766119 18 + TSS region transcription start site region 7892
Tssr7893 1 87776936 to 87776941 5 + TSS region transcription start site region 7893
Gm25395 1 87776938 to 87777209 271 + snoRNA gene predicted gene, 25395
Scarna6 1 87784571 to 87784818 247 + snoRNA gene small Cajal body-specific RNA 6
Tssr7894 1 87803638 to 87803662 24 + TSS region transcription start site region 7894
Sag 1 87803680 to 87845158 41478 + protein coding gene S-antigen, retina and pineal gland (arrestin)
Tssr7895 1 87803863 to 87803880 17 + TSS region transcription start site region 7895
Tssr7896 1 87803897 to 87803906 9 + TSS region transcription start site region 7896
Tssr7897 1 87803915 to 87803929 14 + TSS region transcription start site region 7897
Tssr7898 1 87803933 to 87803945 12 + TSS region transcription start site region 7898
Tssr7899 1 87813342 to 87813351 9 + TSS region transcription start site region 7899
Tssr7900 1 87814796 to 87814808 12 + TSS region transcription start site region 7900