Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:67192446-69572446

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pwgrq10 1 40828848 to 67231097 26402249 QTL post-weaning growth rate QTL 10
Pwgrq9 1 40828848 to 67231097 26402249 QTL post-weaning growth rate QTL 9
Pwgrq11 1 40828848 to 67231097 26402249 QTL post-weaning growth rate QTL 11
Cps1 1 67123026 to 67231259 108233 + protein coding gene carbamoyl-phosphate synthetase 1
Tssr7226 1 67193280 to 67193298 18 + TSS region transcription start site region 7226
Tssr7227 1 67193762 to 67193774 12 + TSS region transcription start site region 7227
Tssr7228 1 67193814 to 67193824 10 + TSS region transcription start site region 7228
Tssr7229 1 67200967 to 67200970 3 + TSS region transcription start site region 7229
Tssr107 1 67206830 to 67206834 4 + TSS region transcription start site region 107
Tssr7230 1 67209583 to 67209595 12 + TSS region transcription start site region 7230
Tssr7231 1 67211248 to 67211311 63 + TSS region transcription start site region 7231
Tssr7232 1 67211319 to 67211332 13 + TSS region transcription start site region 7232
Tssr108 1 67212985 to 67212987 2 + TSS region transcription start site region 108
Tssr7233 1 67215523 to 67215533 10 + TSS region transcription start site region 7233
Tssr7234 1 67220497 to 67220507 10 + TSS region transcription start site region 7234
Tssr7235 1 67220512 to 67220533 21 + TSS region transcription start site region 7235
Tssr7236 1 67220541 to 67220550 9 + TSS region transcription start site region 7236
Tssr7237 1 67220558 to 67220572 14 + TSS region transcription start site region 7237
Tssr109 1 67226574 to 67226576 2 + TSS region transcription start site region 109
Tssr7238 1 67228237 to 67228248 11 + TSS region transcription start site region 7238
Tssr7239 1 67229410 to 67229428 18 + TSS region transcription start site region 7239
Tssr7240 1 67230403 to 67230425 22 + TSS region transcription start site region 7240
Tssr7241 1 67230433 to 67230496 63 + TSS region transcription start site region 7241
Tssr7242 1 67230541 to 67230555 14 + TSS region transcription start site region 7242
Tssr7243 1 67230560 to 67230566 6 + TSS region transcription start site region 7243
Tssr7244 1 67230596 to 67230602 6 + TSS region transcription start site region 7244
Tssr7245 1 67230610 to 67230628 18 + TSS region transcription start site region 7245
Tssr7246 1 67230643 to 67230653 10 + TSS region transcription start site region 7246
Tssr7247 1 67230690 to 67230697 7 + TSS region transcription start site region 7247
Tssr7248 1 67230707 to 67230733 26 + TSS region transcription start site region 7248
Tssr7249 1 67230762 to 67230787 25 + TSS region transcription start site region 7249
Tssr7250 1 67230810 to 67230823 13 + TSS region transcription start site region 7250
Tssr7251 1 67230859 to 67230877 18 + TSS region transcription start site region 7251
Tssr7252 1 67230898 to 67230901 3 + TSS region transcription start site region 7252
Tssr7253 1 67230920 to 67230925 5 + TSS region transcription start site region 7253
Tssr7254 1 67233420 to 67233428 8 + TSS region transcription start site region 7254
Gm15668 1 67249200 to 67323609 74409 + lincRNA gene predicted gene 15668
Gm26342 1 67257224 to 67257352 128 + snoRNA gene predicted gene, 26342
D1Mit364 1 67262205 to 67262313 108 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 364
Gm39658 1 67345246 to 67367949 22703 - lncRNA gene predicted gene, 39658
Tssr7255 1 67437199 to 67437200 1 + TSS region transcription start site region 7255
Kif22-ps 1 67585053 to 67587036 1983 + pseudogene kinesin family member 22, pseudogene
Gm22548 1 67616975 to 67617052 77 + miRNA gene predicted gene, 22548
Gm15669 1 67792481 to 67805324 12843 + lincRNA gene predicted gene 15669
D1Mit328 1 67841302 to 67841422 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 328
Obq24 1 67851057 to 67851057 0 QTL obesity QTL 24
Gm37957 1 67903230 to 67905532 2302 + unclassified gene predicted gene, 37957
Gm23189 1 67973676 to 67973777 101 + miRNA gene predicted gene, 23189
Gm15671 1 68024243 to 68025763 1520 + lincRNA gene predicted gene 15671
Emo4 1 68032186 to 86307305 18275119 QTL emotionality 4
Erbb4 1 68032186 to 69108059 1075873 - protein coding gene erb-b2 receptor tyrosine kinase 4
Gm37100 1 68115195 to 68116547 1352 - unclassified gene predicted gene, 37100
Tssr12042 1 68184415 to 68184420 5 - TSS region transcription start site region 12042
Gm15670 1 68293280 to 68293726 446 - pseudogene predicted gene 15670
Tgq9 1 68382446 to 68382446 0 QTL triglyceride QTL 9
Gm25542 1 68384942 to 68385035 93 - snRNA gene predicted gene, 25542
Gm19335 1 68591618 to 68593686 2068 - unclassified gene predicted gene, 19335
Gm37735 1 68639424 to 68640829 1405 - unclassified gene predicted gene, 37735
Gm37769 1 68711037 to 68713405 2368 - unclassified gene predicted gene, 37769
D1Mit178 1 68723089 to 68723270 181 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 178
Gm37061 1 68758485 to 68761727 3242 - unclassified gene predicted gene, 37061
Tssr12043 1 68766570 to 68766572 2 - TSS region transcription start site region 12043
Tssr12044 1 68780833 to 68780834 1 - TSS region transcription start site region 12044
Tssr12045 1 68910902 to 68910905 3 - TSS region transcription start site region 12045
Tssr12046 1 68938640 to 68938645 5 - TSS region transcription start site region 12046
Tssr12047 1 68966690 to 68966726 36 - TSS region transcription start site region 12047
Tssr12048 1 68978720 to 68978724 4 - TSS region transcription start site region 12048
C530042K13Rik 1 68998386 to 69000268 1882 unclassified gene RIKEN cDNA C530042K13 gene
Tssr12049 1 69041917 to 69041921 4 - TSS region transcription start site region 12049
Gm16076 1 69091913 to 69106740 14827 - sense intronic lncRNA gene predicted gene 16076
Tssr12050 1 69097005 to 69097006 1 - TSS region transcription start site region 12050
Tssr12051 1 69103176 to 69103180 4 - TSS region transcription start site region 12051
Cpgi341 1 69106096 to 69108381 2285 CpG island CpG island 341
Tssr12052 1 69108039 to 69108064 25 - TSS region transcription start site region 12052
Tssr12053 1 69108258 to 69108275 17 - TSS region transcription start site region 12053
Tssr12054 1 69108418 to 69108460 42 - TSS region transcription start site region 12054
Tssr12055 1 69108535 to 69108577 42 - TSS region transcription start site region 12055
Gm8840 1 69130914 to 69131299 385 - pseudogene predicted gene 8840
Tssr12056 1 69131331 to 69131338 7 - TSS region transcription start site region 12056
Cpgi342 1 69376935 to 69378353 1418 CpG island CpG island 342
Pced1c-ps 1 69377321 to 69378071 750 + pseudogene PC-esterase domain containing 1C, pseudogene
Gm28497 1 69441056 to 69444084 3028 + lincRNA gene predicted gene 28497
Gm29113 1 69490357 to 69493788 3431 - lincRNA gene predicted gene 29113
Gm29114 1 69513932 to 69547707 33775 + antisense lncRNA gene predicted gene 29114
Ikzf2 1 69531214 to 69687245 156031 - protein coding gene IKAROS family zinc finger 2
Tssr12057 1 69537200 to 69537209 9 - TSS region transcription start site region 12057
Tssr12058 1 69541316 to 69541343 27 - TSS region transcription start site region 12058
Tssr12059 1 69541370 to 69541382 12 - TSS region transcription start site region 12059
Tssr12060 1 69547877 to 69547890 13 - TSS region transcription start site region 12060
Tssr12061 1 69548717 to 69548726 9 - TSS region transcription start site region 12061
Tssr12062 1 69548786 to 69548792 6 - TSS region transcription start site region 12062
Tssr12063 1 69548941 to 69548944 3 - TSS region transcription start site region 12063
Tssr12064 1 69548980 to 69549014 34 - TSS region transcription start site region 12064