Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:66398367-66769148

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map2 1 66175273 to 66442583 267310 + protein coding gene microtubule-associated protein 2
Tssr7159 1 66412952 to 66412971 19 + TSS region transcription start site region 7159
Tssr7160 1 66413494 to 66413505 11 + TSS region transcription start site region 7160
Tssr7161 1 66421716 to 66421761 45 + TSS region transcription start site region 7161
Gm25411 1 66436082 to 66436232 150 + snRNA gene predicted gene, 25411
Tssr7162 1 66439768 to 66439777 9 + TSS region transcription start site region 7162
Tssr7163 1 66440168 to 66440188 20 + TSS region transcription start site region 7163
Cpgi336 1 66467761 to 66468889 1128 CpG island CpG island 336
Tssr7164 1 66467912 to 66467994 82 + TSS region transcription start site region 7164
Tssr7165 1 66468225 to 66468264 39 + TSS region transcription start site region 7165
Tssr7166 1 66468289 to 66468302 13 + TSS region transcription start site region 7166
Tssr7167 1 66468364 to 66468435 71 + TSS region transcription start site region 7167
Unc80 1 66468367 to 66699148 230781 + protein coding gene unc-80, NALCN activator
Tssr7168 1 66472059 to 66472080 21 + TSS region transcription start site region 7168
Idd5.3 1 66484003 to 70037917 3553914 QTL insulin dependent diabetes susceptibility 5.3
Gm39655 1 66649712 to 66653295 3583 - lncRNA gene predicted gene, 39655
Gm37181 1 66690630 to 66692356 1726 - unclassified gene predicted gene, 37181
Tssr7169 1 66696694 to 66696715 21 + TSS region transcription start site region 7169
A030001O10Rik 1 66696997 to 66699865 2868 unclassified gene RIKEN cDNA A030001O10 gene
Cpgi337 1 66700653 to 66701552 899 CpG island CpG island 337
Rpe 1 66700831 to 66719805 18974 + protein coding gene ribulose-5-phosphate-3-epimerase
Tssr7170 1 66700852 to 66700859 7 + TSS region transcription start site region 7170
Tssr7171 1 66700862 to 66700875 13 + TSS region transcription start site region 7171
Tssr7172 1 66700876 to 66700898 22 + TSS region transcription start site region 7172
Tssr7173 1 66705174 to 66705180 6 + TSS region transcription start site region 7173
Kansl1l 1 66719248 to 66817562 98314 - protein coding gene KAT8 regulatory NSL complex subunit 1-like
Gm46093 1 66738220 to 66762014 23794 + lncRNA gene predicted gene, 46093
2810488O17Rik 1 66757393 to 66758374 981 unclassified gene RIKEN cDNA 2810488O17 gene
Tssr11997 1 66765084 to 66765087 3 - TSS region transcription start site region 11997
Gm37570 1 66765626 to 66768731 3105 - unclassified gene predicted gene, 37570
Tssr11998 1 66765709 to 66765728 19 - TSS region transcription start site region 11998