Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:59998247-60253953

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ica1l 1 59989068 to 60043512 54444 - protein coding gene islet cell autoantigen 1-like
Cpgi298 1 60042472 to 60043649 1177 CpG island CpG island 298
Tssr11842 1 60042931 to 60042975 44 - TSS region transcription start site region 11842
Tssr11843 1 60043092 to 60043175 83 - TSS region transcription start site region 11843
D1Wsu158e 1 60074991 to 60075177 186 DNA segment DNA segment, Chr 1, Wayne State University 158, expressed
Wdr12 1 60076868 to 60098500 21632 - protein coding gene WD repeat domain 12
Cpgi299 1 60097579 to 60097775 196 CpG island CpG island 299
Tssr11844 1 60097612 to 60097702 90 - TSS region transcription start site region 11844
Tssr11845 1 60097893 to 60097924 31 - TSS region transcription start site region 11845
Cpgi300 1 60098069 to 60098829 760 CpG island CpG island 300
Tssr11846 1 60098104 to 60098118 14 - TSS region transcription start site region 11846
Tssr11847 1 60098140 to 60098151 11 - TSS region transcription start site region 11847
Tssr11848 1 60098167 to 60098187 20 - TSS region transcription start site region 11848
Tssr11849 1 60098188 to 60098199 11 - TSS region transcription start site region 11849
Carf 1 60098247 to 60153953 55706 + protein coding gene calcium response factor
Tssr6917 1 60098254 to 60098290 36 + TSS region transcription start site region 6917
Tssr6918 1 60117229 to 60117240 11 + TSS region transcription start site region 6918
Gm15464 1 60117255 to 60117685 430 + pseudogene predicted gene 15464
Cpgi301 1 60180136 to 60181187 1051 CpG island CpG island 301
Tssr11850 1 60180357 to 60180368 11 - TSS region transcription start site region 11850
Tssr6919 1 60180565 to 60180618 53 + TSS region transcription start site region 6919
Nbeal1 1 60180599 to 60338328 157729 + protein coding gene neurobeachin like 1
Tssr6920 1 60181581 to 60181591 10 + TSS region transcription start site region 6920
Tssr6921 1 60231340 to 60231343 3 + TSS region transcription start site region 6921