Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:42553931-42686594

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46089 1 42560407 to 42573333 12926 - lncRNA gene predicted gene, 46089
Gm36822 1 42573783 to 42582017 8234 - lncRNA gene predicted gene, 36822
Gm30248 1 42598931 to 42641594 42663 - lncRNA gene predicted gene, 30248
D1Mit517 1 42627598 to 42627715 117 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-517
Pantr1 1 42648200 to 42694825 46625 - lincRNA gene POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
Tssr11451 1 42651324 to 42651328 4 - TSS region transcription start site region 11451
4930420N18Rik 1 42651726 to 42652401 675 + unclassified gene RIKEN cDNA 4930420N18 gene
Tssr11452 1 42654492 to 42654497 5 - TSS region transcription start site region 11452
D1Mit433 1 42659196 to 42659320 124 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 433
Tssr11453 1 42665076 to 42665086 10 - TSS region transcription start site region 11453
Tssr11454 1 42667638 to 42667673 35 - TSS region transcription start site region 11454
Tssr67 1 42672789 to 42672815 26 + TSS region transcription start site region 67
Tssr11455 1 42681432 to 42681435 3 - TSS region transcription start site region 11455
Gm42411 1 42682365 to 42696565 14200 + lncRNA gene predicted gene 42411
Cpgi203 1 42684253 to 42685140 887 CpG island CpG island 203
Cpgi204 1 42686176 to 42687005 829 CpG island CpG island 204