Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:40520639-40640677

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il18rap 1 40515362 to 40551705 36343 + protein coding gene interleukin 18 receptor accessory protein
Tssr11444 1 40529311 to 40529331 20 - TSS region transcription start site region 11444
Tssr6480 1 40529600 to 40529611 11 + TSS region transcription start site region 6480
Tssr11445 1 40534390 to 40534393 3 - TSS region transcription start site region 11445
Tssr6481 1 40534525 to 40534534 9 + TSS region transcription start site region 6481
Tssr6482 1 40542957 to 40542970 13 + TSS region transcription start site region 6482
Tssr6483 1 40542984 to 40542991 7 + TSS region transcription start site region 6483
Tssr6484 1 40542994 to 40543008 14 + TSS region transcription start site region 6484
Gm35801 1 40572183 to 40580519 8336 - antisense lncRNA gene predicted gene, 35801
Tssr6485 1 40580068 to 40580092 24 + TSS region transcription start site region 6485
Slc9a4 1 40580081 to 40630725 50644 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 4
Tssr11446 1 40580146 to 40580152 6 - TSS region transcription start site region 11446
Tssr6486 1 40580293 to 40580302 9 + TSS region transcription start site region 6486
Tssr6487 1 40580312 to 40580334 22 + TSS region transcription start site region 6487
Tssr6488 1 40580340 to 40580349 9 + TSS region transcription start site region 6488
Tssr6489 1 40580363 to 40580374 11 + TSS region transcription start site region 6489
Tssr6490 1 40580471 to 40580481 10 + TSS region transcription start site region 6490
Tssr6491 1 40580492 to 40580510 18 + TSS region transcription start site region 6491
Tssr6492 1 40580521 to 40580531 10 + TSS region transcription start site region 6492
Tssr11447 1 40580639 to 40580677 38 - TSS region transcription start site region 11447
Gm37435 1 40582895 to 40586841 3946 - unclassified gene predicted gene, 37435
Tssr6493 1 40600913 to 40600949 36 + TSS region transcription start site region 6493
Tssr6494 1 40606255 to 40606261 6 + TSS region transcription start site region 6494
Tssr6495 1 40606319 to 40606330 11 + TSS region transcription start site region 6495