MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:38576448-38678304

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Aff3	1	38175393 to 38628333	452940	-	protein coding gene	AF4/FMR2 family, member 3
Tssr11338	1	38603922 to 38603925	3	-	TSS region	transcription start site region 11338
Tssr11339	1	38615538 to 38615542	4	-	TSS region	transcription start site region 11339
Cpgi178	1	38626448 to 38628304	1856		CpG island	CpG island 178
Tssr11340	1	38627415 to 38627467	52	-	TSS region	transcription start site region 11340
Tssr11341	1	38627538 to 38627549	11	-	TSS region	transcription start site region 11341
Tssr11342	1	38627569 to 38627582	13	-	TSS region	transcription start site region 11342
Tssr11343	1	38627586 to 38627605	19	-	TSS region	transcription start site region 11343
Tssr11344	1	38628077 to 38628092	15	-	TSS region	transcription start site region 11344
Gm34596	1	38630667 to 38653368	22701	+	lncRNA gene	predicted gene, 34596
Tssr11345	1	38638631 to 38638633	2	-	TSS region	transcription start site region 11345
Tssr11346	1	38664922 to 38664933	11	-	TSS region	transcription start site region 11346
Tssr11347	1	38664934 to 38664945	11	-	TSS region	transcription start site region 11347
Tssr11348	1	38664947 to 38665000	53	-	TSS region	transcription start site region 11348
Tssr11349	1	38665005 to 38665012	7	-	TSS region	transcription start site region 11349
Tssr11350	1	38665023 to 38665034	11	-	TSS region	transcription start site region 11350
Tssr11351	1	38665592 to 38665599	7	-	TSS region	transcription start site region 11351