MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:38441478-38641608

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Aff3	1	38175393 to 38628333	452940	-	protein coding gene	AF4/FMR2 family, member 3
Tssr11336	1	38472450 to 38472453	3	-	TSS region	transcription start site region 11336
Gm34727	1	38487519 to 38488047	528	+	pseudogene	predicted gene, 34727
Tssr11337	1	38491806 to 38491810	4	-	TSS region	transcription start site region 11337
D1Dcr26	1	38528672 to 38528767	95		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 26
D1Dcr27	1	38541472 to 38541568	96		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 27
D1Mit321	1	38541478 to 38541608	130		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 321
2310050P20Rik	1	38554284 to 38556376	2092		unclassified gene	RIKEN cDNA 2310050P20 gene
Tssr11338	1	38603922 to 38603925	3	-	TSS region	transcription start site region 11338
Tssr11339	1	38615538 to 38615542	4	-	TSS region	transcription start site region 11339
Cpgi178	1	38626448 to 38628304	1856		CpG island	CpG island 178
Tssr11340	1	38627415 to 38627467	52	-	TSS region	transcription start site region 11340
Tssr11341	1	38627538 to 38627549	11	-	TSS region	transcription start site region 11341
Tssr11342	1	38627569 to 38627582	13	-	TSS region	transcription start site region 11342
Tssr11343	1	38627586 to 38627605	19	-	TSS region	transcription start site region 11343
Tssr11344	1	38628077 to 38628092	15	-	TSS region	transcription start site region 11344
Gm34596	1	38630667 to 38653368	22701	+	lncRNA gene	predicted gene, 34596
Tssr11345	1	38638631 to 38638633	2	-	TSS region	transcription start site region 11345