Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:38341806-38641810

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aff3 1 38175393 to 38628333 452940 - protein coding gene AF4/FMR2 family, member 3
Cpgi177 1 38358854 to 38359432 578 CpG island CpG island 177
Gm16152 1 38384949 to 38393974 9025 + antisense lncRNA gene predicted gene 16152
Tssr53 1 38393972 to 38393975 3 - TSS region transcription start site region 53
Tssr11336 1 38472450 to 38472453 3 - TSS region transcription start site region 11336
Gm34727 1 38487519 to 38488047 528 + pseudogene predicted gene, 34727
Tssr11337 1 38491806 to 38491810 4 - TSS region transcription start site region 11337
D1Dcr26 1 38528672 to 38528767 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 26
D1Dcr27 1 38541472 to 38541568 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 27
D1Mit321 1 38541478 to 38541608 130 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 321
2310050P20Rik 1 38554284 to 38556376 2092 unclassified gene RIKEN cDNA 2310050P20 gene
Tssr11338 1 38603922 to 38603925 3 - TSS region transcription start site region 11338
Tssr11339 1 38615538 to 38615542 4 - TSS region transcription start site region 11339
Cpgi178 1 38626448 to 38628304 1856 CpG island CpG island 178
Tssr11340 1 38627415 to 38627467 52 - TSS region transcription start site region 11340
Tssr11341 1 38627538 to 38627549 11 - TSS region transcription start site region 11341
Tssr11342 1 38627569 to 38627582 13 - TSS region transcription start site region 11342
Tssr11343 1 38627586 to 38627605 19 - TSS region transcription start site region 11343
Tssr11344 1 38628077 to 38628092 15 - TSS region transcription start site region 11344
Gm34596 1 38630667 to 38653368 22701 + lncRNA gene predicted gene, 34596
Tssr11345 1 38638631 to 38638633 2 - TSS region transcription start site region 11345