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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:36903812-37312608

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem131 1 36792189 to 36939874 147685 - protein coding gene transmembrane protein 131
Tssr6289 1 36903970 to 36903982 12 + TSS region transcription start site region 6289
Tssr6290 1 36903989 to 36903999 10 + TSS region transcription start site region 6290
Gm38115 1 36913601 to 36916539 2938 - sense intronic lncRNA gene predicted gene, 38115
F830112A20Rik 1 36922797 to 36926348 3551 - protein coding gene RIKEN cDNA F830112A20 gene
Tssr11283 1 36932060 to 36932065 5 - TSS region transcription start site region 11283
Cpgi157 1 36938822 to 36940329 1507 CpG island CpG island 157
Tssr11284 1 36939494 to 36939503 9 - TSS region transcription start site region 11284
Tssr11285 1 36939521 to 36939532 11 - TSS region transcription start site region 11285
Tssr11286 1 36939554 to 36939565 11 - TSS region transcription start site region 11286
Tssr11287 1 36939602 to 36939655 53 - TSS region transcription start site region 11287
Tssr11288 1 36939666 to 36939667 1 - TSS region transcription start site region 11288
Tssr6291 1 36939990 to 36940016 26 + TSS region transcription start site region 6291
Tssr11289 1 36943800 to 36943809 9 - TSS region transcription start site region 11289
Tssr11290 1 36943810 to 36943842 32 - TSS region transcription start site region 11290
Rpl12-ps1 1 36957930 to 36958427 497 - pseudogene ribosomal protein L12, pseudogene 1
Tssr11291 1 36958517 to 36958519 2 - TSS region transcription start site region 11291
Tssr6292 1 36983991 to 36984006 15 + TSS region transcription start site region 6292
Tssr6293 1 36984593 to 36984629 36 + TSS region transcription start site region 6293
Tssr11292 1 36985770 to 36985779 9 - TSS region transcription start site region 11292
Tssr11293 1 36985822 to 36985836 14 - TSS region transcription start site region 11293
Tssr6294 1 36986257 to 36986269 12 + TSS region transcription start site region 6294
n-R5s210 1 37005439 to 37005557 118 + rRNA gene nuclear encoded rRNA 5S 210
Vwa3b 1 37028812 to 37187608 158796 + protein coding gene von Willebrand factor A domain containing 3B
Cpgi158 1 37028980 to 37029575 595 CpG island CpG island 158
Tssr6295 1 37029307 to 37029339 32 + TSS region transcription start site region 6295
Tssr6296 1 37029347 to 37029357 10 + TSS region transcription start site region 6296
Gm39626 1 37042567 to 37046351 3784 - lncRNA gene predicted gene, 39626
Tssr44 1 37089658 to 37089660 2 + TSS region transcription start site region 44
Tssr6297 1 37100609 to 37100616 7 + TSS region transcription start site region 6297
Tssr6298 1 37100660 to 37100672 12 + TSS region transcription start site region 6298
Gm37020 1 37132273 to 37133264 991 - antisense lncRNA gene predicted gene, 37020
Tssr45 1 37153822 to 37153825 3 + TSS region transcription start site region 45
Tssr6299 1 37153840 to 37153857 17 + TSS region transcription start site region 6299
Tssr6300 1 37153858 to 37153870 12 + TSS region transcription start site region 6300
Tssr6301 1 37153874 to 37153896 22 + TSS region transcription start site region 6301
Tssr11294 1 37169943 to 37169944 1 - TSS region transcription start site region 11294
D1Ertd799e 1 37197459 to 37197708 249 DNA segment DNA segment, Chr 1, ERATO Doi 799, expressed
Cnga3 1 37218241 to 37263384 45143 + protein coding gene cyclic nucleotide gated channel alpha 3
Cpgi159 1 37218594 to 37218855 261 CpG island CpG island 159
Tssr6302 1 37219191 to 37219201 10 + TSS region transcription start site region 6302
Tssr6303 1 37246709 to 37246717 8 + TSS region transcription start site region 6303
Tssr6304 1 37246742 to 37246751 9 + TSS region transcription start site region 6304
Cpgi160 1 37261278 to 37261487 209 CpG island CpG island 160
1700074A21Rik 1 37299352 to 37299697 345 - unclassified gene RIKEN cDNA 1700074A21 gene
Cpgi161 1 37299643 to 37300586 943 CpG island CpG island 161
Tssr6305 1 37299859 to 37299870 11 + TSS region transcription start site region 6305
Inpp4a 1 37299865 to 37410736 110871 + protein coding gene inositol polyphosphate-4-phosphatase, type I
Tssr6306 1 37299882 to 37299937 55 + TSS region transcription start site region 6306