Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:36413952-36536110

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fer1l5 1 36372291 to 36422110 49819 + protein coding gene fer-1-like 5 (C. elegans)
Lman2l 1 36422063 to 36445272 23209 - protein coding gene lectin, mannose-binding 2-like
Cpgi142 1 36444716 to 36445452 736 CpG island CpG island 142
Tssr11257 1 36445231 to 36445242 11 - TSS region transcription start site region 11257
Tssr11258 1 36445248 to 36445264 16 - TSS region transcription start site region 11258
Gm33401 1 36461978 to 36462873 895 + lncRNA gene predicted gene, 33401
Tssr6266 1 36461996 to 36462007 11 + TSS region transcription start site region 6266
Gm33454 1 36464718 to 36471546 6828 - lncRNA gene predicted gene, 33454
Cpgi143 1 36471073 to 36472494 1421 CpG island CpG island 143
Tssr6267 1 36471590 to 36471606 16 + TSS region transcription start site region 6267
Cnnm4 1 36471620 to 36508764 37144 + protein coding gene cyclin M4
Gm37909 1 36473952 to 36476110 2158 + unclassified gene predicted gene, 37909
Tssr6268 1 36490151 to 36490154 3 + TSS region transcription start site region 6268
Tssr6269 1 36492709 to 36492736 27 + TSS region transcription start site region 6269
Gm47280 1 36506562 to 36506702 140 + miRNA gene predicted gene, 47280
Tssr6270 1 36506858 to 36506862 4 + TSS region transcription start site region 6270
Cpgi144 1 36511399 to 36513213 1814 CpG island CpG island 144
Cnnm3 1 36511867 to 36528237 16370 + protein coding gene cyclin M3
Tssr6271 1 36511868 to 36511903 35 + TSS region transcription start site region 6271
Gm38033 1 36527534 to 36528237 703 - antisense lncRNA gene predicted gene, 38033
Ankrd23 1 36530193 to 36536556 6363 - protein coding gene ankyrin repeat domain 23
Gm42417 1 36530193 to 36539429 9236 - protein coding gene predicted gene, 42417
Tssr11259 1 36534727 to 36534734 7 - TSS region transcription start site region 11259
Tssr11260 1 36535719 to 36535764 45 - TSS region transcription start site region 11260