Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:3200901-3676498

Filter by:
22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xkr4 1 3205901 to 3671498 465597 - protein coding gene X-linked Kx blood group related 4
Gm18956 1 3252757 to 3253236 479 + pseudogene predicted gene, 18956
Tssr10865 1 3319504 to 3319507 3 - TSS region transcription start site region 10865
Gm39585 1 3361552 to 3377812 16260 + lncRNA gene predicted gene, 39585
Gm37180 1 3365731 to 3368549 2818 - unclassified gene predicted gene, 37180
Gm37363 1 3375556 to 3377788 2232 - unclassified gene predicted gene, 37363
Tssr10866 1 3377786 to 3377789 3 - TSS region transcription start site region 10866
Gm37686 1 3464977 to 3467285 2308 - unclassified gene predicted gene, 37686
Gm1992 1 3466587 to 3513553 46966 + antisense lncRNA gene predicted gene 1992
Tssr10867 1 3489149 to 3489153 4 - TSS region transcription start site region 10867
Gm37329 1 3512451 to 3514507 2056 - unclassified gene predicted gene, 37329
Cpgi1 1 3531623 to 3531920 297 CpG island CpG island 1
Gm7341 1 3531795 to 3532720 925 + pseudogene predicted gene 7341
Gm38148 1 3592892 to 3595903 3011 - unclassified gene predicted gene, 38148
Gm19938 1 3647309 to 3658904 11595 - sense intronic lncRNA gene predicted gene, 19938
D1Mit475 1 3652137 to 3652249 112 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 475
Tssr10868 1 3654895 to 3654899 4 - TSS region transcription start site region 10868
Tssr10869 1 3667834 to 3667838 4 - TSS region transcription start site region 10869
Cpgi2 1 3670453 to 3672677 2224 CpG island CpG island 2
Tssr10870 1 3671671 to 3671733 62 - TSS region transcription start site region 10870
Tssr10871 1 3671770 to 3671808 38 - TSS region transcription start site region 10871
Tssr5795 1 3674608 to 3674612 4 + TSS region transcription start site region 5795