Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:192412828-192871219

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnh1 1 192190774 to 192510159 319385 + protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 1
D1Mit510 1 192417892 to 192418116 224 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 510
Hhat 1 192512828 to 192771219 258391 - protein coding gene hedgehog acyltransferase
Gm31011 1 192514824 to 192520709 5885 + lncRNA gene predicted gene, 31011
D1Mit210 1 192529010 to 192529115 105 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 210
Orch4 1 192529010 to 192529115 105 QTL autoimmune orchitis resistance 4
Tssr15827 1 192718210 to 192718213 3 - TSS region transcription start site region 15827
Tssr10803 1 192745568 to 192745573 5 + TSS region transcription start site region 10803
Gm22265 1 192745571 to 192745686 115 + snRNA gene predicted gene, 22265
Tssr10804 1 192759417 to 192759432 15 + TSS region transcription start site region 10804
Cpgi1234 1 192770478 to 192771366 888 CpG island CpG island 1234
Tssr15828 1 192771199 to 192771245 46 - TSS region transcription start site region 15828
Gm31078 1 192781701 to 192787119 5418 + lncRNA gene predicted gene, 31078
Tssr10805 1 192812176 to 192812177 1 + TSS region transcription start site region 10805
Tssr10806 1 192813038 to 192813040 2 + TSS region transcription start site region 10806
Gm38360 1 192820674 to 192821127 453 - pseudogene predicted gene, 38360
A730013G03Rik 1 192833118 to 192835214 2096 - unclassified gene RIKEN cDNA A730013G03 gene
Cpgi1235 1 192833482 to 192834216 734 CpG island CpG island 1235
Cpgi1236 1 192834373 to 192835165 792 CpG island CpG island 1236
Tssr15829 1 192834557 to 192834558 1 - TSS region transcription start site region 15829
Cpgi1237 1 192835456 to 192835693 237 CpG island CpG island 1237
Tssr10807 1 192841667 to 192841676 9 + TSS region transcription start site region 10807
Tssr10808 1 192841682 to 192841690 8 + TSS region transcription start site region 10808
1700065J18Rik 1 192841705 to 192842739 1034 + lincRNA gene RIKEN cDNA 1700065J18 gene
Sertad4 1 192844488 to 192855752 11264 - protein coding gene SERTA domain containing 4
Cpgi1238 1 192854545 to 192856172 1627 CpG island CpG island 1238
Tssr10809 1 192854916 to 192854937 21 + TSS region transcription start site region 10809
Gm15867 1 192854923 to 192856246 1323 + antisense lncRNA gene predicted gene 15867
Tssr15830 1 192855573 to 192855606 33 - TSS region transcription start site region 15830
Tssr15831 1 192855650 to 192855679 29 - TSS region transcription start site region 15831
Tssr15832 1 192855683 to 192855715 32 - TSS region transcription start site region 15832
Tssr15833 1 192855723 to 192855736 13 - TSS region transcription start site region 15833
Tssr15834 1 192855894 to 192855907 13 - TSS region transcription start site region 15834