Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:186047315-186648425

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shali5 1 155706491 to 186261999 30555508 QTL survival time to hyperoxic acute lung injury 5
Emo1 1 163149528 to 186261999 23112471 QTL emotionality 1
Lyplal1 1 186087732 to 186117310 29578 - protein coding gene lysophospholipase-like 1
Gm38268 1 186112181 to 186112373 192 - unclassified gene predicted gene, 38268
Cpgi1174 1 186116889 to 186117447 558 CpG island CpG island 1174
Tssr15675 1 186117251 to 186117294 43 - TSS region transcription start site region 15675
Gm23821 1 186123201 to 186123306 105 + rRNA gene predicted gene, 23821
Gm35201 1 186137851 to 186154619 16768 + lncRNA gene predicted gene, 35201
Tssr10623 1 186137939 to 186137971 32 + TSS region transcription start site region 10623
Gm37134 1 186177338 to 186223789 46451 + lincRNA gene predicted gene, 37134
D1Mit407 1 186177593 to 186177711 118 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 407
Bmd1c 1 186177593 to 189571420 3393827 QTL bone mineral density 1c
Gm37272 1 186182257 to 186182744 487 + unclassified gene predicted gene, 37272
D1Mit361 1 186261829 to 186261999 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 361
D1Mit361.3 1 186262012 to 186262127 115 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 361.3
Tssr15676 1 186309313 to 186309314 1 - TSS region transcription start site region 15676
Gm37491 1 186347315 to 186348425 1110 + unclassified gene predicted gene, 37491
Gm35341 1 186407824 to 186420512 12688 + lncRNA gene predicted gene, 35341
Gm35426 1 186463840 to 186486460 22620 - lncRNA gene predicted gene, 35426
A730004F24Rik 1 186511838 to 186558681 46843 - lincRNA gene RIKEN cDNA A730004F24 gene
Tssr10624 1 186512106 to 186512108 2 + TSS region transcription start site region 10624
Tssr15677 1 186558504 to 186558521 17 - TSS region transcription start site region 15677
Gm35546 1 186587070 to 186614781 27711 + lncRNA gene predicted gene, 35546
Tssr10625 1 186587295 to 186587310 15 + TSS region transcription start site region 10625
Tssr10626 1 186587315 to 186587350 35 + TSS region transcription start site region 10626
Tssr10627 1 186587362 to 186587372 10 + TSS region transcription start site region 10627
Tssr10628 1 186587404 to 186587413 9 + TSS region transcription start site region 10628
Tssr10629 1 186587479 to 186587492 13 + TSS region transcription start site region 10629
Tssr10630 1 186587503 to 186587515 12 + TSS region transcription start site region 10630
Tgfb2 1 186622792 to 186705989 83197 - protein coding gene transforming growth factor, beta 2
Tssr15678 1 186623746 to 186623756 10 - TSS region transcription start site region 15678
Tssr15679 1 186624297 to 186624303 6 - TSS region transcription start site region 15679
Tssr15680 1 186625210 to 186625216 6 - TSS region transcription start site region 15680
Tssr15681 1 186634021 to 186634034 13 - TSS region transcription start site region 15681