Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:185487338-186913789

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nba10 1 152919071 to 186706423 33787352 QTL New Zealand Black autoimmunity 10
Shali5 1 155706491 to 186261999 30555508 QTL survival time to hyperoxic acute lung injury 5
Emo1 1 163149528 to 186261999 23112471 QTL emotionality 1
Gm34969 1 185487269 to 185502904 15635 + lncRNA gene predicted gene, 34969
Tssr10621 1 185487328 to 185487344 16 + TSS region transcription start site region 10621
5033404E19Rik 1 185497306 to 185498014 708 + pseudogene RIKEN cDNA 5033404E19 gene
Tssr10622 1 185534380 to 185534413 33 + TSS region transcription start site region 10622
Gm35023 1 185618605 to 185644334 25729 + lncRNA gene predicted gene, 35023
Gm38093 1 185744803 to 185757772 12969 + lincRNA gene predicted gene, 38093
Gm9722 1 185878084 to 185878885 801 - pseudogene predicted gene 9722
Tssr365 1 185969950 to 185969957 7 + TSS region transcription start site region 365
Gm39729 1 186031078 to 186034344 3266 - lncRNA gene predicted gene, 39729
Lyplal1 1 186087732 to 186117310 29578 - protein coding gene lysophospholipase-like 1
Gm38268 1 186112181 to 186112373 192 - unclassified gene predicted gene, 38268
Cpgi1174 1 186116889 to 186117447 558 CpG island CpG island 1174
Tssr15675 1 186117251 to 186117294 43 - TSS region transcription start site region 15675
Gm23821 1 186123201 to 186123306 105 + rRNA gene predicted gene, 23821
Gm35201 1 186137851 to 186154619 16768 + lncRNA gene predicted gene, 35201
Tssr10623 1 186137939 to 186137971 32 + TSS region transcription start site region 10623
Gm37134 1 186177338 to 186223789 46451 + lincRNA gene predicted gene, 37134
Bmd1c 1 186177593 to 189571420 3393827 QTL bone mineral density 1c
D1Mit407 1 186177593 to 186177711 118 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 407
Gm37272 1 186182257 to 186182744 487 + unclassified gene predicted gene, 37272
D1Mit361 1 186261829 to 186261999 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 361
D1Mit361.3 1 186262012 to 186262127 115 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 361.3
Tssr15676 1 186309313 to 186309314 1 - TSS region transcription start site region 15676
Gm37491 1 186347315 to 186348425 1110 + unclassified gene predicted gene, 37491
Gm35341 1 186407824 to 186420512 12688 + lncRNA gene predicted gene, 35341
Gm35426 1 186463840 to 186486460 22620 - lncRNA gene predicted gene, 35426
A730004F24Rik 1 186511838 to 186558681 46843 - lincRNA gene RIKEN cDNA A730004F24 gene
Tssr10624 1 186512106 to 186512108 2 + TSS region transcription start site region 10624
Tssr15677 1 186558504 to 186558521 17 - TSS region transcription start site region 15677
Gm35546 1 186587070 to 186614781 27711 + lncRNA gene predicted gene, 35546
Tssr10625 1 186587295 to 186587310 15 + TSS region transcription start site region 10625
Tssr10626 1 186587315 to 186587350 35 + TSS region transcription start site region 10626
Tssr10627 1 186587362 to 186587372 10 + TSS region transcription start site region 10627
Tssr10628 1 186587404 to 186587413 9 + TSS region transcription start site region 10628
Tssr10629 1 186587479 to 186587492 13 + TSS region transcription start site region 10629
Tssr10630 1 186587503 to 186587515 12 + TSS region transcription start site region 10630
Tgfb2 1 186622792 to 186705989 83197 - protein coding gene transforming growth factor, beta 2
Tssr15678 1 186623746 to 186623756 10 - TSS region transcription start site region 15678
Tssr15679 1 186624297 to 186624303 6 - TSS region transcription start site region 15679
Tssr15680 1 186625210 to 186625216 6 - TSS region transcription start site region 15680
Tssr15681 1 186634021 to 186634034 13 - TSS region transcription start site region 15681
Gm26169 1 186676742 to 186676876 134 + snoRNA gene predicted gene, 26169
Tssr15682 1 186689367 to 186689410 43 - TSS region transcription start site region 15682
Gm35655 1 186701980 to 186703803 1823 + lncRNA gene predicted gene, 35655
Cpgi1175 1 186704229 to 186704747 518 CpG island CpG island 1175
Tssr15683 1 186704511 to 186704583 72 - TSS region transcription start site region 15683
Tssr15684 1 186704956 to 186704964 8 - TSS region transcription start site region 15684
Tssr15685 1 186704993 to 186705023 30 - TSS region transcription start site region 15685
Tssr10631 1 186705013 to 186705022 9 + TSS region transcription start site region 10631
Cpgi1176 1 186705072 to 186706158 1086 CpG island CpG island 1176
Tssr15686 1 186705236 to 186705245 9 - TSS region transcription start site region 15686
Tssr15687 1 186705264 to 186705295 31 - TSS region transcription start site region 15687
Tssr15688 1 186705316 to 186705325 9 - TSS region transcription start site region 15688
Tssr15689 1 186705326 to 186705356 30 - TSS region transcription start site region 15689
Tssr15690 1 186705563 to 186705598 35 - TSS region transcription start site region 15690
Gm29491 1 186705695 to 186707033 1338 + antisense lncRNA gene predicted gene 29491
Tssr10632 1 186705894 to 186705919 25 + TSS region transcription start site region 10632
Tssr15691 1 186705980 to 186705999 19 - TSS region transcription start site region 15691
Tssr15692 1 186706048 to 186706060 12 - TSS region transcription start site region 15692
Tssr15693 1 186706061 to 186706097 36 - TSS region transcription start site region 15693
D1Mit461 1 186706303 to 186706423 120 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 461
Tssr10633 1 186709469 to 186709471 2 + TSS region transcription start site region 10633
Gm37849 1 186711218 to 186713098 1880 - unclassified gene predicted gene, 37849
Rrp15 1 186721086 to 186749358 28272 - protein coding gene ribosomal RNA processing 15 homolog (S. cerevisiae)
Cpgi1177 1 186748998 to 186749609 611 CpG island CpG island 1177
Tssr15694 1 186749284 to 186749293 9 - TSS region transcription start site region 15694
Tssr15695 1 186749304 to 186749340 36 - TSS region transcription start site region 15695
Tssr10634 1 186749368 to 186749415 47 + TSS region transcription start site region 10634
A430105J06Rik 1 186749396 to 186752921 3525 + lincRNA gene RIKEN cDNA A430105J06 gene
Cpgi1178 1 186833359 to 186833625 266 CpG island CpG island 1178
Cpgi1179 1 186833918 to 186834812 894 CpG island CpG island 1179
Cpgi1180 1 186858479 to 186858737 258 CpG island CpG island 1180