Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:18233428-19184336

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Defb18 1 18236473 to 18237443 970 - protein coding gene defensin beta 18
Tssr11068 1 18237473 to 18237478 5 - TSS region transcription start site region 11068
D1Ertd230e 1 18247918 to 18248152 234 DNA segment DNA segment, Chr 1, ERATO Doi 230, expressed
Defb41 1 18250980 to 18265138 14158 - protein coding gene defensin beta 41
Gm17837 1 18262395 to 18263379 984 - pseudogene predicted gene, 17837
Tssr11069 1 18265130 to 18265141 11 - TSS region transcription start site region 11069
D1Mit230 1 18333801 to 18333927 126 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 230
Gm5252 1 18708428 to 18709336 908 + pseudogene predicted gene 5252
Gm24075 1 18969762 to 18969833 71 - snoRNA gene predicted gene, 24075
Gm28343 1 19037266 to 19037377 111 + pseudogene predicted gene 28343
Gm28344 1 19062857 to 19063135 278 + pseudogene predicted gene 28344
Gm15825 1 19063300 to 19075464 12164 - antisense lncRNA gene predicted gene 15825
Cpgi63 1 19096944 to 19097168 224 CpG island CpG island 63
Tfap2d 1 19103022 to 19166346 63324 + protein coding gene transcription factor AP-2, delta
Tssr6026 1 19103031 to 19103043 12 + TSS region transcription start site region 6026
Cpgi64 1 19104091 to 19104915 824 CpG island CpG island 64
Tssr6027 1 19104131 to 19104138 7 + TSS region transcription start site region 6027
Tssr6028 1 19104173 to 19104188 15 + TSS region transcription start site region 6028
Tssr6029 1 19104688 to 19104693 5 + TSS region transcription start site region 6029
Gm10075 1 19153422 to 19153966 544 - pseudogene predicted gene 10075
D1Mit298 1 19182865 to 19183007 142 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 298