Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180991129-181192265

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ephx1 1 180989556 to 181017569 28013 - protein coding gene epoxide hydrolase 1, microsomal
Tssr15561 1 180994025 to 180994035 10 - TSS region transcription start site region 15561
Tssr15562 1 180996093 to 180996104 11 - TSS region transcription start site region 15562
Tssr15563 1 180996145 to 180996155 10 - TSS region transcription start site region 15563
Tssr15564 1 180999845 to 180999860 15 - TSS region transcription start site region 15564
Tssr15565 1 181001899 to 181001917 18 - TSS region transcription start site region 15565
Tssr15566 1 181001939 to 181001973 34 - TSS region transcription start site region 15566
Aaj1 1 181004752 to 192168463 11163711 QTL anxiety in A/J 1
Axtq1 1 181004752 to 192168463 11163711 QTL anxiety QTL 1
D1Mit151 1 181004752 to 181004865 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 151
Cpgi1129 1 181017196 to 181017546 350 CpG island CpG island 1129
Tssr15567 1 181017489 to 181017548 59 - TSS region transcription start site region 15567
Gm37431 1 181022663 to 181022773 110 - pseudogene predicted gene, 37431
Gm37086 1 181026278 to 181029729 3451 + unclassified gene predicted gene, 37086
Tssr10510 1 181035594 to 181035643 49 + TSS region transcription start site region 10510
Gm39716 1 181047133 to 181078853 31720 - lncRNA gene predicted gene, 39716
Tssr10511 1 181051232 to 181051242 10 + TSS region transcription start site region 10511
9130409I23Rik 1 181051237 to 181060667 9430 + protein coding gene RIKEN cDNA 9130409I23 gene
Tssr10512 1 181051249 to 181051266 17 + TSS region transcription start site region 10512
Gm17967 1 181052528 to 181053174 646 - pseudogene predicted gene, 17967
Tssr10513 1 181062058 to 181062075 17 + TSS region transcription start site region 10513
Gm37406 1 181062070 to 181064475 2405 + lincRNA gene predicted gene, 37406
Gm6606 1 181074183 to 181076640 2457 + pseudogene predicted gene 6606
Nvl 1 181087138 to 181144204 57066 - protein coding gene nuclear VCP-like
Fgfr3-ps 1 181091129 to 181092265 1136 + pseudogene fibroblast growth factor receptor 3, pseudogene
Tssr15568 1 181093745 to 181093749 4 - TSS region transcription start site region 15568
Tssr15569 1 181093782 to 181093795 13 - TSS region transcription start site region 15569
Tssr15570 1 181101571 to 181101595 24 - TSS region transcription start site region 15570
Cpgi1130 1 181143786 to 181144697 911 CpG island CpG island 1130
Tssr15571 1 181144133 to 181144183 50 - TSS region transcription start site region 15571
Tssr15572 1 181144198 to 181144209 11 - TSS region transcription start site region 15572
Tssr10514 1 181144226 to 181144246 20 + TSS region transcription start site region 10514
Tssr325 1 181144248 to 181144275 27 + TSS region transcription start site region 325
Tssr10515 1 181144427 to 181144457 30 + TSS region transcription start site region 10515
Cnih4 1 181150345 to 181168994 18649 + protein coding gene cornichon family AMPA receptor auxiliary protein 4
Cpgi1131 1 181150777 to 181151473 696 CpG island CpG island 1131
Tssr10516 1 181150926 to 181150984 58 + TSS region transcription start site region 10516
Tssr326 1 181151005 to 181151016 11 + TSS region transcription start site region 326
Wdr26 1 181173228 to 181211552 38324 - protein coding gene WD repeat domain 26
Tssr15573 1 181174555 to 181174566 11 - TSS region transcription start site region 15573