MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:180841151-180878113

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr10492	1	180848305 to 180848337	32	+	TSS region	transcription start site region 10492
Tssr15552	1	180848649 to 180848658	9	-	TSS region	transcription start site region 15552
Tssr321	1	180848677 to 180848688	11	-	TSS region	transcription start site region 321
Tssr322	1	180848695 to 180848711	16	-	TSS region	transcription start site region 322
Tssr15553	1	180848924 to 180848939	15	-	TSS region	transcription start site region 15553
Tssr10493	1	180849132 to 180849144	12	+	TSS region	transcription start site region 10493
Tssr10494	1	180849159 to 180849170	11	+	TSS region	transcription start site region 10494
Tssr323	1	180849182 to 180849192	10	+	TSS region	transcription start site region 323
Tssr10495	1	180849220 to 180849228	8	+	TSS region	transcription start site region 10495
Cpgi1123	1	180850425 to 180851467	1042		CpG island	CpG island 1123
Tssr15554	1	180850860 to 180850864	4	-	TSS region	transcription start site region 15554
Tssr10496	1	180851087 to 180851110	23	+	TSS region	transcription start site region 10496
Tssr10497	1	180851113 to 180851130	17	+	TSS region	transcription start site region 10497
Tssr10498	1	180851131 to 180851172	41	+	TSS region	transcription start site region 10498
Sde2	1	180851151 to 180868113	16962	+	protein coding gene	SDE2 telomere maintenance homolog (S. pombe)
Gm20305	1	180854282 to 180854458	176	-	pseudogene	predicted gene, 20305
Gm18036	1	180874878 to 180875326	448	+	pseudogene	predicted gene, 18036
Gm39714	1	180875512 to 180885858	10346	-	lncRNA gene	predicted gene, 39714