Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:177958301-178329272

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Catspere1 1 177808550 to 177962233 153683 + protein coding gene cation channel sperm associated auxiliary subunit epsilon 1
Cpgi1085 1 177983088 to 177983750 662 CpG island CpG island 1085
Catspere2 1 177983423 to 178172704 189281 + protein coding gene catsper channel auxiliary subunit epsilon 2
Tssr10371 1 177983427 to 177983463 36 + TSS region transcription start site region 10371
Tssr10372 1 177983466 to 177983477 11 + TSS region transcription start site region 10372
Gm37313 1 177989662 to 177998739 9077 - pseudogene predicted gene, 37313
Gm25312 1 178028033 to 178028139 106 - snRNA gene predicted gene, 25312
Cpgi1086 1 178143191 to 178143357 166 CpG island CpG island 1086
Gm8010 1 178143301 to 178144272 971 + pseudogene predicted gene 8010
Gm10519 1 178186328 to 178187883 1555 unclassified gene predicted gene 10519
Cpgi1087 1 178187308 to 178188010 702 CpG island CpG island 1087
Desi2 1 178187417 to 178252598 65181 + protein coding gene desumoylating isopeptidase 2
Tssr10373 1 178187679 to 178187713 34 + TSS region transcription start site region 10373
Tssr10374 1 178187721 to 178187725 4 + TSS region transcription start site region 10374
Tssr10375 1 178211141 to 178211190 49 + TSS region transcription start site region 10375
Tssr10376 1 178236504 to 178236508 4 + TSS region transcription start site region 10376
Gm8023 1 178266204 to 178267106 902 + pseudogene predicted gene 8023
Cpgi1088 1 178275722 to 178276977 1255 CpG island CpG island 1088
4930527J03Rik 1 178276047 to 178276641 594 - unclassified non-coding RNA gene RIKEN cDNA 4930527J03 gene
Tssr15462 1 178276636 to 178276651 15 - TSS region transcription start site region 15462
D1Mit371.1b 1 178283043 to 178283154 111 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 371.1b
D1Mit371 1 178283143 to 178283287 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 371
Gm46174 1 178283380 to 178299913 16533 - lncRNA gene predicted gene, 46174
Gm37486 1 178299396 to 178299800 404 + pseudogene predicted gene, 37486
Tssr10377 1 178299499 to 178299514 15 + TSS region transcription start site region 10377
B230369F24Rik 1 178314003 to 178315735 1732 - antisense lncRNA gene RIKEN cDNA B230369F24 gene
Tssr15463 1 178315472 to 178315482 10 - TSS region transcription start site region 15463
Cpgi1089 1 178318116 to 178319327 1211 CpG island CpG island 1089
Tssr15464 1 178318170 to 178318192 22 - TSS region transcription start site region 15464
Tssr15465 1 178318199 to 178318211 12 - TSS region transcription start site region 15465
Tssr10378 1 178318810 to 178318865 55 + TSS region transcription start site region 10378
Tssr10379 1 178319127 to 178319138 11 + TSS region transcription start site region 10379
Cox20 1 178319130 to 178322693 3563 + protein coding gene cytochrome c oxidase assembly protein 20
Tssr10380 1 178319142 to 178319171 29 + TSS region transcription start site region 10380
Tssr10381 1 178319269 to 178319289 20 + TSS region transcription start site region 10381
Tssr10382 1 178319328 to 178319339 11 + TSS region transcription start site region 10382
Hnrnpu 1 178321108 to 178337797 16689 - protein coding gene heterogeneous nuclear ribonucleoprotein U
Tssr15466 1 178329056 to 178329068 12 - TSS region transcription start site region 15466
Tssr15467 1 178329178 to 178329193 15 - TSS region transcription start site region 15467