Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:173578625-175319602

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217 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa30 1 169211172 to 174628870 5417698 QTL B.burgdorferi-associated arthritis 30
Szs1 1 171051174 to 174628870 3577696 QTL seizure susceptibility 1
Ifi213 1 173566595 to 173599302 32707 - protein coding gene interferon activated gene 213
Tssr15280 1 173599243 to 173599277 34 - TSS region transcription start site region 15280
Tssr10277 1 173630813 to 173630834 21 + TSS region transcription start site region 10277
Tssr10278 1 173630847 to 173630882 35 + TSS region transcription start site region 10278
Tssr10279 1 173630894 to 173630897 3 + TSS region transcription start site region 10279
Ifi209 1 173630917 to 173647928 17011 + protein coding gene interferon activated gene 209
Tssr10280 1 173631005 to 173631018 13 + TSS region transcription start site region 10280
Tssr10281 1 173631027 to 173631068 41 + TSS region transcription start site region 10281
Tssr10282 1 173631070 to 173631080 10 + TSS region transcription start site region 10282
Tssr10283 1 173631107 to 173631126 19 + TSS region transcription start site region 10283
Tssr10284 1 173633676 to 173633683 7 + TSS region transcription start site region 10284
Tssr10285 1 173641208 to 173641221 13 + TSS region transcription start site region 10285
Tssr10286 1 173641289 to 173641313 24 + TSS region transcription start site region 10286
Tssr10287 1 173641403 to 173641420 17 + TSS region transcription start site region 10287
Tssr10288 1 173641426 to 173641436 10 + TSS region transcription start site region 10288
Tssr10289 1 173641441 to 173641454 13 + TSS region transcription start site region 10289
Tssr10290 1 173641462 to 173641478 16 + TSS region transcription start site region 10290
Gm44339 1 173643511 to 173643594 83 - miRNA gene predicted gene, 44339
Tssr10291 1 173647826 to 173647846 20 + TSS region transcription start site region 10291
Tssr305 1 173673628 to 173673637 9 + TSS region transcription start site region 305
Tssr10292 1 173673651 to 173673686 35 + TSS region transcription start site region 10292
Ifi208 1 173673675 to 173698395 24720 + protein coding gene interferon activated gene 208
Tssr10293 1 173673702 to 173673710 8 + TSS region transcription start site region 10293
Tssr10294 1 173673783 to 173673808 25 + TSS region transcription start site region 10294
Tssr10295 1 173673901 to 173673916 15 + TSS region transcription start site region 10295
Gm18752 1 173701385 to 173704063 2678 + pseudogene predicted gene, 18752
Cpgi1063 1 173712067 to 173712281 214 CpG island CpG island 1063
Gm7871 1 173712735 to 173715660 2925 - pseudogene predicted gene 7871
Ifi207 1 173723427 to 173741747 18320 - protein coding gene interferon activated gene 207
Tssr10296 1 173729098 to 173729131 33 + TSS region transcription start site region 10296
Tssr10297 1 173729141 to 173729157 16 + TSS region transcription start site region 10297
Tssr15281 1 173729142 to 173729196 54 - TSS region transcription start site region 15281
Tssr15282 1 173729314 to 173729321 7 - TSS region transcription start site region 15282
Tssr15283 1 173729354 to 173729365 11 - TSS region transcription start site region 15283
Tssr15284 1 173729456 to 173729467 11 - TSS region transcription start site region 15284
Tssr15285 1 173729492 to 173729540 48 - TSS region transcription start site region 15285
Tssr15286 1 173729541 to 173729566 25 - TSS region transcription start site region 15286
Tssr15287 1 173729569 to 173729582 13 - TSS region transcription start site region 15287
Tssr15288 1 173729631 to 173729642 11 - TSS region transcription start site region 15288
Tssr15289 1 173729748 to 173729770 22 - TSS region transcription start site region 15289
Tssr15290 1 173729919 to 173729940 21 - TSS region transcription start site region 15290
Tssr15291 1 173730034 to 173730045 11 - TSS region transcription start site region 15291
Tssr15292 1 173730049 to 173730079 30 - TSS region transcription start site region 15292
Tssr15293 1 173730088 to 173730119 31 - TSS region transcription start site region 15293
Tssr15294 1 173730140 to 173730160 20 - TSS region transcription start site region 15294
Tssr15295 1 173730171 to 173730204 33 - TSS region transcription start site region 15295
Tssr15296 1 173730431 to 173730440 9 - TSS region transcription start site region 15296
Tssr10298 1 173730478 to 173730510 32 + TSS region transcription start site region 10298
Tssr15297 1 173732371 to 173732395 24 - TSS region transcription start site region 15297
Tssr15298 1 173732708 to 173732716 8 - TSS region transcription start site region 15298
Tssr10299 1 173735210 to 173735218 8 + TSS region transcription start site region 10299
Tssr15299 1 173735216 to 173735226 10 - TSS region transcription start site region 15299
Tssr15300 1 173737941 to 173737953 12 - TSS region transcription start site region 15300
Tssr15301 1 173738110 to 173738122 12 - TSS region transcription start site region 15301
Tssr15302 1 173738186 to 173738200 14 - TSS region transcription start site region 15302
Tssr15303 1 173738894 to 173738919 25 - TSS region transcription start site region 15303
Tssr15304 1 173741007 to 173741027 20 - TSS region transcription start site region 15304
Tssr15305 1 173741690 to 173741701 11 - TSS region transcription start site region 15305
Tssr15306 1 173741717 to 173741755 38 - TSS region transcription start site region 15306
Tssr15307 1 173741758 to 173741786 28 - TSS region transcription start site region 15307
Tssr15308 1 173741795 to 173741817 22 - TSS region transcription start site region 15308
Ifi204 1 173747293 to 173766943 19650 - protein coding gene interferon activated gene 204
Tssr15309 1 173748078 to 173748092 14 - TSS region transcription start site region 15309
Tssr15310 1 173748206 to 173748209 3 - TSS region transcription start site region 15310
Tssr15311 1 173748281 to 173748293 12 - TSS region transcription start site region 15311
Tssr15312 1 173748877 to 173748888 11 - TSS region transcription start site region 15312
Tssr15313 1 173748932 to 173748951 19 - TSS region transcription start site region 15313
Tssr15314 1 173755933 to 173755953 20 - TSS region transcription start site region 15314
Tssr15315 1 173760167 to 173760207 40 - TSS region transcription start site region 15315
Tssr15316 1 173766901 to 173766928 27 - TSS region transcription start site region 15316
Tssr15317 1 173766945 to 173766979 34 - TSS region transcription start site region 15317
Tssr15318 1 173766986 to 173766997 11 - TSS region transcription start site region 15318
Tssr15319 1 173767026 to 173767044 18 - TSS region transcription start site region 15319
Tssr15320 1 173775298 to 173775312 14 - TSS region transcription start site region 15320
Ifi203-ps 1 173776529 to 173798270 21741 - pseudogene interferon activated gene 203, pseudogene
Tssr15321 1 173782985 to 173782994 9 - TSS region transcription start site region 15321
Tssr15322 1 173787230 to 173787233 3 - TSS region transcription start site region 15322
Tssr15323 1 173798112 to 173798117 5 - TSS region transcription start site region 15323
Tssr15324 1 173802711 to 173802730 19 - TSS region transcription start site region 15324
Tssr15325 1 173802740 to 173802760 20 - TSS region transcription start site region 15325
Gm7897 1 173829799 to 173832254 2455 - pseudogene predicted gene 7897
Tssr15326 1 173846464 to 173846469 5 - TSS region transcription start site region 15326
Gm38050 1 173849149 to 173850780 1631 - pseudogene predicted gene, 38050
Mndal 1 173857220 to 173880375 23155 - protein coding gene myeloid nuclear differentiation antigen like
Tssr15327 1 173871412 to 173871447 35 - TSS region transcription start site region 15327
Tssr15328 1 173871801 to 173871812 11 - TSS region transcription start site region 15328
Tssr15329 1 173872882 to 173872920 38 - TSS region transcription start site region 15329
Tssr15330 1 173872946 to 173872967 21 - TSS region transcription start site region 15330
Tssr15331 1 173874422 to 173874435 13 - TSS region transcription start site region 15331
Tssr15332 1 173875856 to 173875866 10 - TSS region transcription start site region 15332
Tssr15333 1 173879950 to 173879969 19 - TSS region transcription start site region 15333
Tssr15334 1 173880141 to 173880164 23 - TSS region transcription start site region 15334
Gm21031 1 173884228 to 173886135 1907 - pseudogene predicted gene, 21031
Ifi211 1 173896345 to 173913046 16701 - protein coding gene interferon activated gene 211
Tssr15335 1 173907440 to 173907468 28 - TSS region transcription start site region 15335
Tssr15336 1 173912904 to 173912932 28 - TSS region transcription start site region 15336
Tssr15337 1 173912933 to 173912938 5 - TSS region transcription start site region 15337
Tssr15338 1 173912948 to 173912961 13 - TSS region transcription start site region 15338
Tssr15339 1 173912990 to 173912999 9 - TSS region transcription start site region 15339
Tssr15340 1 173913028 to 173913042 14 - TSS region transcription start site region 15340
Ifi203 1 173920407 to 173942672 22265 - protein coding gene interferon activated gene 203
Tssr15341 1 173921248 to 173921298 50 - TSS region transcription start site region 15341
Tssr15342 1 173921647 to 173921671 24 - TSS region transcription start site region 15342
Tssr15343 1 173922038 to 173922064 26 - TSS region transcription start site region 15343
Tssr15344 1 173923086 to 173923098 12 - TSS region transcription start site region 15344
Tssr15345 1 173923842 to 173923845 3 - TSS region transcription start site region 15345
Tssr15346 1 173929061 to 173929079 18 - TSS region transcription start site region 15346
Tssr15347 1 173933458 to 173933468 10 - TSS region transcription start site region 15347
Tssr15348 1 173937844 to 173937852 8 - TSS region transcription start site region 15348
Tssr15349 1 173940629 to 173940638 9 - TSS region transcription start site region 15349
Tssr15350 1 173942445 to 173942472 27 - TSS region transcription start site region 15350
Ifi202b 1 173962568 to 173982744 20176 - protein coding gene interferon activated gene 202B
Tssr15351 1 173963904 to 173963924 20 - TSS region transcription start site region 15351
Tssr15352 1 173971344 to 173971357 13 - TSS region transcription start site region 15352
Tssr15353 1 173971707 to 173971731 24 - TSS region transcription start site region 15353
Tssr15354 1 173974853 to 173974930 77 - TSS region transcription start site region 15354
Tssr15355 1 173974964 to 173975039 75 - TSS region transcription start site region 15355
Tssr306 1 173975046 to 173975056 10 - TSS region transcription start site region 306
Tssr15356 1 173975063 to 173975121 58 - TSS region transcription start site region 15356
Tssr15357 1 173976952 to 173976977 25 - TSS region transcription start site region 15357
Tssr15358 1 173977286 to 173977302 16 - TSS region transcription start site region 15358
Tssr15359 1 173977326 to 173977341 15 - TSS region transcription start site region 15359
Tssr15360 1 173979433 to 173979450 17 - TSS region transcription start site region 15360
Tssr15361 1 173979488 to 173979503 15 - TSS region transcription start site region 15361
Tssr15362 1 173979613 to 173979644 31 - TSS region transcription start site region 15362
Tssr15363 1 173979757 to 173979771 14 - TSS region transcription start site region 15363
Tssr15364 1 173979830 to 173979841 11 - TSS region transcription start site region 15364
Tssr15365 1 173979885 to 173979896 11 - TSS region transcription start site region 15365
Tssr15366 1 173979903 to 173979915 12 - TSS region transcription start site region 15366
Tssr15367 1 173979921 to 173979934 13 - TSS region transcription start site region 15367
Tssr15368 1 173980023 to 173980034 11 - TSS region transcription start site region 15368
Tssr15369 1 173982260 to 173982286 26 - TSS region transcription start site region 15369
Tssr15370 1 173982842 to 173982848 6 - TSS region transcription start site region 15370
Gm18445 1 173986926 to 174001972 15046 - pseudogene predicted gene, 18445
Ifi205 1 174011998 to 174031755 19757 - protein coding gene interferon activated gene 205
Tssr15371 1 174024400 to 174024438 38 - TSS region transcription start site region 15371
Tssr15372 1 174027299 to 174027324 25 - TSS region transcription start site region 15372
Tssr15373 1 174028270 to 174028279 9 - TSS region transcription start site region 15373
Tssr15374 1 174028299 to 174028310 11 - TSS region transcription start site region 15374
Tssr15375 1 174028367 to 174028378 11 - TSS region transcription start site region 15375
Tssr15376 1 174028415 to 174028428 13 - TSS region transcription start site region 15376
Tssr15377 1 174028452 to 174028462 10 - TSS region transcription start site region 15377
Tssr15378 1 174028477 to 174028489 12 - TSS region transcription start site region 15378
Tssr15379 1 174031712 to 174031728 16 - TSS region transcription start site region 15379
Tssr15380 1 174031779 to 174031789 10 - TSS region transcription start site region 15380
Tssr15381 1 174031797 to 174031827 30 - TSS region transcription start site region 15381
Tssr15382 1 174031836 to 174031845 9 - TSS region transcription start site region 15382
Tssr10300 1 174041003 to 174041028 25 + TSS region transcription start site region 10300
Olfr433 1 174041933 to 174042936 1003 + protein coding gene olfactory receptor 433
Olfr432 1 174050375 to 174051313 938 + protein coding gene olfactory receptor 432
Olfr431-ps1 1 174051998 to 174052541 543 + pseudogene olfactory receptor 431, pseudogene 1
Olfr430 1 174069300 to 174070253 953 + protein coding gene olfactory receptor 430
Olfr429 1 174089038 to 174089980 942 + protein coding gene olfactory receptor 429
Olfr428-ps1 1 174094970 to 174095361 391 + pseudogene olfactory receptor 428, pseudogene 1
Olfr427 1 174099460 to 174100408 948 + protein coding gene olfactory receptor 427
Gm37417 1 174110980 to 174111343 363 + pseudogene predicted gene, 37417
Olfr231 1 174117091 to 174118014 923 - protein coding gene olfactory receptor 231
Olfr424 1 174136746 to 174137693 947 + protein coding gene olfactory receptor 424
Olfr258-ps1 1 174142190 to 174143081 891 + pseudogene olfactory receptor 258, pseudogene 1
Olfr421-ps1 1 174151481 to 174152530 1049 + polymorphic pseudogene olfactory receptor 421, pseudogene 1
Olfr420 1 174158722 to 174159767 1045 + protein coding gene olfactory receptor 420
Gm43440 1 174167702 to 174169724 2022 + pseudogene predicted gene 43440
Gm36196 1 174168604 to 174172654 4050 - lncRNA gene predicted gene, 36196
Tssr10301 1 174172738 to 174172782 44 + TSS region transcription start site region 10301
Spta1 1 174172776 to 174248449 75673 + protein coding gene spectrin alpha, erythrocytic 1
Tssr10302 1 174172810 to 174172857 47 + TSS region transcription start site region 10302
Tssr10303 1 174172888 to 174172916 28 + TSS region transcription start site region 10303
Tssr10304 1 174173807 to 174173813 6 + TSS region transcription start site region 10304
Tssr10305 1 174191056 to 174191062 6 + TSS region transcription start site region 10305
Tssr307 1 174191849 to 174191860 11 + TSS region transcription start site region 307
Tssr10306 1 174211654 to 174211658 4 + TSS region transcription start site region 10306
Tssr10307 1 174215425 to 174215434 9 + TSS region transcription start site region 10307
Tssr15383 1 174240189 to 174240192 3 - TSS region transcription start site region 15383
Olfr419 1 174249889 to 174250976 1087 - protein coding gene olfactory receptor 419
D1Sta12 1 174297942 to 174298073 131 DNA segment DNA segment, Chr 1, Philip Stanier 12
Mptx1 1 174330518 to 174332873 2355 + protein coding gene mucosal pentraxin 1
Tssr10308 1 174330518 to 174330521 3 + TSS region transcription start site region 10308
Olfr417 1 174368919 to 174369848 929 + protein coding gene olfactory receptor 417
Olfr416-ps1 1 174374547 to 174375683 1136 + pseudogene olfactory receptor 416, pseudogene 1
Olfr248 1 174391046 to 174392055 1009 + protein coding gene olfactory receptor 248
Olfr414 1 174430430 to 174431384 954 + protein coding gene olfactory receptor 414
D1Sta13 1 174446409 to 174446560 151 DNA segment DNA segment, Chr 1, Philip Stanier 13
Olfr220 1 174448625 to 174449602 977 + protein coding gene olfactory receptor 220
D1Mit541 1 174472116 to 174472238 122 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 541
Tssr308 1 174497762 to 174497770 8 - TSS region transcription start site region 308
Cpgi1064 1 174501672 to 174503663 1991 CpG island CpG island 1064
Tssr10309 1 174501796 to 174501843 47 + TSS region transcription start site region 10309
Fmn2 1 174501825 to 174822729 320904 + protein coding gene formin 2
Tssr10310 1 174501850 to 174501887 37 + TSS region transcription start site region 10310
Gvhd1 1 174628733 to 174628870 137 QTL graft-versus-host disease 1
Mnotch 1 174628733 to 174628870 137 QTL modifier of Notch
Melm2 1 174628733 to 174628870 137 QTL melanoma modifier 2
Cq2 1 174628733 to 174628870 137 QTL cholesterol QTL 2
Fglu2 1 174628733 to 174628870 137 QTL fasting glucose 2
D1Mit150 1 174628733 to 174628870 137 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 150
Cbm1 1 174628733 to 174628870 137 QTL cerebellum weight 1
Bslm4 1 174628733 to 174628870 137 QTL basal locomotor activity 4
D1Sta14 1 174648173 to 174648252 79 DNA segment DNA segment, Chr 1, Philip Stanier 14