Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:172521620-172570806

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfap45 1 172521130 to 172545870 24740 + protein coding gene cilia and flagella associated protein 45
Tssr15229 1 172522671 to 172522682 11 - TSS region transcription start site region 15229
Tssr15230 1 172526374 to 172526382 8 - TSS region transcription start site region 15230
Cpgi1055 1 172526746 to 172527016 270 CpG island CpG island 1055
Tssr15231 1 172526832 to 172526834 2 - TSS region transcription start site region 15231
Cpgi1056 1 172532445 to 172532849 404 CpG island CpG island 1056
4933439K11Rik 1 172541620 to 172550806 9186 - lncRNA gene RIKEN cDNA 4933439K11 gene
Cpgi1057 1 172544961 to 172545418 457 CpG island CpG island 1057
Tssr10238 1 172548730 to 172548763 33 + TSS region transcription start site region 10238
Tssr15232 1 172550652 to 172550717 65 - TSS region transcription start site region 15232
Tssr10239 1 172550744 to 172550769 25 + TSS region transcription start site region 10239
Tssr10240 1 172555932 to 172555942 10 + TSS region transcription start site region 10240
Vsig8 1 172555938 to 172563717 7779 + protein coding gene V-set and immunoglobulin domain containing 8
Tssr15233 1 172558123 to 172558142 19 - TSS region transcription start site region 15233
Tssr15234 1 172558147 to 172558162 15 - TSS region transcription start site region 15234
D1Mit456 1 172559415 to 172559524 109 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 456
Cpgi1058 1 172561907 to 172563640 1733 CpG island CpG island 1058